Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.14■□□□□ 0.97
THRAP10827 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.14■□□□□ 0.97
THRAP10827 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.14■□□□□ 0.97
THRAP10827 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.14■□□□□ 0.97
THRAP10827 AL137784.2-201ENST00000607332 1000 ntBASIC21.14■□□□□ 0.97
THRAP10827 AC092437.1-201ENST00000624794 1048 ntBASIC21.14■□□□□ 0.97
THRAP10827 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
THRAP10827 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
THRAP10827 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
THRAP10827 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.14■□□□□ 0.97
THRAP10827 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
THRAP10827 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
THRAP10827 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
THRAP10827 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
THRAP10827 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
THRAP10827 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.13■□□□□ 0.97
THRAP10827 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
THRAP10827 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THRAP10827 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.13■□□□□ 0.97
THRAP10827 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THRAP10827 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.13■□□□□ 0.97
THRAP10827 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
THRAP10827 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
THRAP10827 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
THRAP10827 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THRAP10827 NTF6G-201ENST00000591094 616 ntBASIC21.13■□□□□ 0.97
THRAP10827 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THRAP10827 RARRES2P11-201ENST00000635158 484 ntBASIC21.13■□□□□ 0.97
THRAP10827 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.13■□□□□ 0.97
THRAP10827 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
THRAP10827 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
THRAP10827 AC244015.2-201ENST00000616358 1861 ntBASIC21.13■□□□□ 0.97
THRAP10827 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
THRAP10827 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THRAP10827 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.12■□□□□ 0.97
THRAP10827 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.12■□□□□ 0.97
THRAP10827 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.12■□□□□ 0.97
THRAP10827 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.12■□□□□ 0.97
THRAP10827 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.12■□□□□ 0.97
THRAP10827 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.12■□□□□ 0.97
THRAP10827 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
THRAP10827 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THRAP10827 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
THRAP10827 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
THRAP10827 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.11■□□□□ 0.97
THRAP10827 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 AC068587.7-201ENST00000641602 218 ntBASIC21.11■□□□□ 0.97
THRAP10827 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
THRAP10827 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THRAP10827 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THRAP10827 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THRAP10827 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THRAP10827 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.1■□□□□ 0.97
THRAP10827 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.1■□□□□ 0.97
THRAP10827 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.1■□□□□ 0.97
THRAP10827 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
THRAP10827 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.1■□□□□ 0.97
THRAP10827 AC090192.1-201ENST00000517740 490 ntBASIC21.1■□□□□ 0.97
THRAP10827 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THRAP10827 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.1■□□□□ 0.97
THRAP10827 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.1■□□□□ 0.97
THRAP10827 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.1■□□□□ 0.97
THRAP10827 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
THRAP10827 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
THRAP10827 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.09■□□□□ 0.97
THRAP10827 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.09■□□□□ 0.97
THRAP10827 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THRAP10827 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
THRAP10827 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THRAP10827 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THRAP10827 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.09■□□□□ 0.97
THRAP10827 AL121603.2-201ENST00000557373 2117 ntBASIC21.09■□□□□ 0.97
THRAP10827 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
THRAP10827 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
THRAP10827 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
THRAP10827 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
THRAP10827 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
THRAP10827 LINC01960-201ENST00000563759 1884 ntBASIC21.09■□□□□ 0.97
THRAP10827 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
THRAP10827 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THRAP10827 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.09■□□□□ 0.97
THRAP10827 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms