Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 YBR242WYBR242W 717 nt5.57□□□□□ -1.52
TY1A-LR1P0CX68 STP1YDR463W 1560 nt5.57□□□□□ -1.52
TY1A-LR1P0CX68 STE13YOR219C 2796 nt5.57□□□□□ -1.52
TY1A-LR1P0CX68 GYP6YJL044C 1377 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 TNA1YGR260W 1605 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 ACS2YLR153C 2052 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 SPR6YER115C 576 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 YFL063WYFL063W 456 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 MRPS18YNL306W 654 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 VAM10YOR068C 345 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 RPS28AYOR167C 204 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 YOR268CYOR268C 399 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 YBR085C-AYBR085C-A 258 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 MGS1YNL218W 1764 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 NOC2YOR206W 2133 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 CBP2YHL038C 1893 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 VPS27YNR006W 1869 nt5.56□□□□□ -1.52
TY1A-LR1P0CX68 TUB1YML085C 1344 nt5.55□□□□□ -1.52
TY1A-LR1P0CX68 WHI3YNL197C 1986 nt5.55□□□□□ -1.52
TY1A-LR1P0CX68 AHC2YCR082W 387 nt5.55□□□□□ -1.52
TY1A-LR1P0CX68 TCD1YHR003C 1290 nt5.55□□□□□ -1.52
TY1A-LR1P0CX68 TDA8YAL064C-A 381 nt5.55□□□□□ -1.52
TY1A-LR1P0CX68 HAP3YBL021C 435 nt5.55□□□□□ -1.52
TY1A-LR1P0CX68 YPL114WYPL114W 420 nt5.55□□□□□ -1.52
TY1A-LR1P0CX68 ENT2YLR206W 1842 nt5.55□□□□□ -1.52
TY1A-LR1P0CX68 SSK22YCR073C 3996 nt5.55□□□□□ -1.52
TY1A-LR1P0CX68 LDB19YOR322C 2457 nt5.54□□□□□ -1.52
TY1A-LR1P0CX68 TOM70YNL121C 1854 nt5.54□□□□□ -1.52
TY1A-LR1P0CX68 PYC2YBR218C 3543 nt5.54□□□□□ -1.52
TY1A-LR1P0CX68 PIL1YGR086C 1020 nt5.54□□□□□ -1.52
TY1A-LR1P0CX68 YIL066W-AYIL066W-A 444 nt5.54□□□□□ -1.52
TY1A-LR1P0CX68 YJL202CYJL202C 348 nt5.54□□□□□ -1.52
TY1A-LR1P0CX68 YBL108WYBL108W 306 nt5.54□□□□□ -1.52
TY1A-LR1P0CX68 PAH1YMR165C 2589 nt5.54□□□□□ -1.52
TY1A-LR1P0CX68 YPS6YIR039C 1614 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 YHR020WYHR020W 2067 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 YHL034W-AYHL034W-A 462 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 YKL069WYKL069W 543 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 TEN1YLR010C 483 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 YMR294W-AYMR294W-A 360 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 YPR123CYPR123C 435 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 snR42snR42 351 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 VPS9YML097C 1356 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 BUD14YAR014C 2130 nt5.53□□□□□ -1.52
TY1A-LR1P0CX68 PPZ1YML016C 2079 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 IMA2YOL157C 1770 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 EDE1YBL047C 4146 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 RBA50YDR527W 1320 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 YDL218WYDL218W 954 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 UBC7YMR022W 498 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 RPS16AYMR143W 432 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 TIR2YOR010C 756 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 TSC3YBR058C-A 243 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 MNS1YJR131W 1650 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 KEX2YNL238W 2445 nt5.52□□□□□ -1.53
TY1A-LR1P0CX68 SWP82YFL049W 1872 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 SKN7YHR206W 1869 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 ATG20YDL113C 1923 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 SAC6YDR129C 1929 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 RPS16BYDL083C 432 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 MRPS28YDR337W 861 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 YER067C-AYER067C-A 324 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 YHR214C-EYHR214C-E 300 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 YIR014WYIR014W 729 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 YOR146WYOR146W 306 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 HIR1YBL008W 2523 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 DSN1YIR010W 1731 nt5.51□□□□□ -1.53
TY1A-LR1P0CX68 HRK1YOR267C 2280 nt5.5□□□□□ -1.53
TY1A-LR1P0CX68 IMG1YCR046C 510 nt5.5□□□□□ -1.53
TY1A-LR1P0CX68 AAD4YDL243C 990 nt5.5□□□□□ -1.53
TY1A-LR1P0CX68 AIM26YKL037W 357 nt5.5□□□□□ -1.53
TY1A-LR1P0CX68 BUD28YLR062C 378 nt5.5□□□□□ -1.53
TY1A-LR1P0CX68 ARX1YDR101C 1782 nt5.5□□□□□ -1.53
TY1A-LR1P0CX68 TDA11YHR159W 1515 nt5.49□□□□□ -1.53
TY1A-LR1P0CX68 YML133CYML133C 4125 nt5.49□□□□□ -1.53
TY1A-LR1P0CX68 YTA12YMR089C 2478 nt5.49□□□□□ -1.53
TY1A-LR1P0CX68 YCR050CYCR050C 309 nt5.49□□□□□ -1.53
TY1A-LR1P0CX68 GTT2YLL060C 702 nt5.49□□□□□ -1.53
TY1A-LR1P0CX68 ABF2YMR072W 552 nt5.49□□□□□ -1.53
TY1A-LR1P0CX68 HSP104YLL026W 2727 nt5.49□□□□□ -1.53
TY1A-LR1P0CX68 TAF12YDR145W 1620 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 YNL095CYNL095C 1929 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 DED81YHR019C 1665 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 CTS1YLR286C 1689 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 HSP30YCR021C 999 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 YGL165CYGL165C 579 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 YLR342W-AYLR342W-A 174 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 GRE2YOL151W 1029 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 YBR016WYBR016W 387 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 YOR192C-CYOR192C-C 237 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 YPR059CYPR059C 387 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 YBR232CYBR232C 360 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 THS1YIL078W 2205 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 ALD6YPL061W 1503 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 NUP53YMR153W 1428 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 DSL1YNL258C 2265 nt5.48□□□□□ -1.53
TY1A-LR1P0CX68 PHO84YML123C 1764 nt5.47□□□□□ -1.53
TY1A-LR1P0CX68 SSK1YLR006C 2139 nt5.47□□□□□ -1.53
TY1A-LR1P0CX68 STN1YDR082W 1485 nt5.47□□□□□ -1.53
TY1A-LR1P0CX68 YCR045W-AYCR045W-A 351 nt5.47□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms