Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXC4P09017 AL109923.1-201ENST00000618799 583 ntBASIC20.76■□□□□ 0.91
HOXC4P09017 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
HOXC4P09017 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXC4P09017 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXC4P09017 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HOXC4P09017 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC4P09017 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.75■□□□□ 0.91
HOXC4P09017 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC4P09017 AC010542.4-201ENST00000563151 1910 ntBASIC20.75■□□□□ 0.91
HOXC4P09017 AC068473.5-201ENST00000616428 2072 ntBASIC20.75■□□□□ 0.91
HOXC4P09017 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC4P09017 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC4P09017 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXC4P09017 AC083906.2-201ENST00000511578 360 ntBASIC20.75■□□□□ 0.91
HOXC4P09017 AL162412.1-201ENST00000567129 965 ntBASIC20.75■□□□□ 0.91
HOXC4P09017 AC068338.2-201ENST00000563278 1430 ntBASIC20.75■□□□□ 0.91
HOXC4P09017 RBM17P2-201ENST00000616397 1405 ntBASIC20.75■□□□□ 0.91
HOXC4P09017 GUSBP5-202ENST00000510805 1989 ntBASIC20.75■□□□□ 0.91
HOXC4P09017 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC4P09017 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXC4P09017 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXC4P09017 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.74■□□□□ 0.91
HOXC4P09017 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC4P09017 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC4P09017 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXC4P09017 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HOXC4P09017 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXC4P09017 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
HOXC4P09017 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC4P09017 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HOXC4P09017 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC4P09017 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXC4P09017 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC4P09017 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HOXC4P09017 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC4P09017 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.73■□□□□ 0.91
HOXC4P09017 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXC4P09017 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXC4P09017 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
HOXC4P09017 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
HOXC4P09017 AC233723.2-201ENST00000623798 2106 ntBASIC20.73■□□□□ 0.91
HOXC4P09017 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HOXC4P09017 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC4P09017 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC4P09017 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXC4P09017 ECEL1P1-201ENST00000373592 1742 ntBASIC20.73■□□□□ 0.91
HOXC4P09017 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXC4P09017 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HOXC4P09017 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC4P09017 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HOXC4P09017 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXC4P09017 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.72■□□□□ 0.91
HOXC4P09017 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXC4P09017 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXC4P09017 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC4P09017 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXC4P09017 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC4P09017 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC4P09017 TSPY6P-201ENST00000448518 926 ntBASIC20.71■□□□□ 0.91
HOXC4P09017 AF201337.1-201ENST00000520239 748 ntBASIC20.71■□□□□ 0.91
HOXC4P09017 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC4P09017 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXC4P09017 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXC4P09017 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC4P09017 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXC4P09017 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HOXC4P09017 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXC4P09017 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC4P09017 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC4P09017 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC4P09017 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXC4P09017 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXC4P09017 AC142086.2-201ENST00000569753 217 ntBASIC20.7■□□□□ 0.9
HOXC4P09017 OR10C1-204ENST00000622521 1039 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms