Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.76■□□□□ 0.91
CAPN1P07384 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN1P07384 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN1P07384 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.76■□□□□ 0.91
CAPN1P07384 AC005229.4-201ENST00000610085 2198 ntBASIC20.76■□□□□ 0.91
CAPN1P07384 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.76■□□□□ 0.91
CAPN1P07384 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN1P07384 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CAPN1P07384 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CAPN1P07384 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.75■□□□□ 0.91
CAPN1P07384 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.75■□□□□ 0.91
CAPN1P07384 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.75■□□□□ 0.91
CAPN1P07384 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.75■□□□□ 0.91
CAPN1P07384 CCDC92B-201ENST00000575506 885 ntBASIC20.75■□□□□ 0.91
CAPN1P07384 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.75■□□□□ 0.91
CAPN1P07384 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CAPN1P07384 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CAPN1P07384 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.75■□□□□ 0.91
CAPN1P07384 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CAPN1P07384 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPN1P07384 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.74■□□□□ 0.91
CAPN1P07384 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CAPN1P07384 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.74■□□□□ 0.91
CAPN1P07384 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.74■□□□□ 0.91
CAPN1P07384 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPN1P07384 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPN1P07384 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.74■□□□□ 0.91
CAPN1P07384 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPN1P07384 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPN1P07384 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CAPN1P07384 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN1P07384 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN1P07384 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN1P07384 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CAPN1P07384 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.73■□□□□ 0.91
CAPN1P07384 TERF1P2-201ENST00000583350 1212 ntBASIC20.73■□□□□ 0.91
CAPN1P07384 AC022517.1-201ENST00000592429 346 ntBASIC20.73■□□□□ 0.91
CAPN1P07384 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.73■□□□□ 0.91
CAPN1P07384 AC105233.4-201ENST00000642045 216 ntBASIC20.73■□□□□ 0.91
CAPN1P07384 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN1P07384 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.73■□□□□ 0.91
CAPN1P07384 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN1P07384 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPN1P07384 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN1P07384 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPN1P07384 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.72■□□□□ 0.91
CAPN1P07384 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.72■□□□□ 0.91
CAPN1P07384 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPN1P07384 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPN1P07384 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN1P07384 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CAPN1P07384 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPN1P07384 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPN1P07384 IKBKGP1-201ENST00000612193 1073 ntBASIC20.71■□□□□ 0.91
CAPN1P07384 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPN1P07384 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms