Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.62■□□□□ 0.57
APOC1P02654 AC024257.2-201ENST00000549699 147 ntBASIC18.62■□□□□ 0.57
APOC1P02654 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.62■□□□□ 0.57
APOC1P02654 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC1P02654 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.62■□□□□ 0.57
APOC1P02654 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.62■□□□□ 0.57
APOC1P02654 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
APOC1P02654 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC1P02654 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APOC1P02654 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
APOC1P02654 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
APOC1P02654 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC1P02654 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC1P02654 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.61■□□□□ 0.57
APOC1P02654 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
APOC1P02654 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC1P02654 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC1P02654 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOC1P02654 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC1P02654 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOC1P02654 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
APOC1P02654 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOC1P02654 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOC1P02654 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.61■□□□□ 0.57
APOC1P02654 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.6■□□□□ 0.57
APOC1P02654 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
APOC1P02654 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
APOC1P02654 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
APOC1P02654 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
APOC1P02654 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.6■□□□□ 0.57
APOC1P02654 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
APOC1P02654 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.6■□□□□ 0.57
APOC1P02654 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.6■□□□□ 0.57
APOC1P02654 IGHV3-19-201ENST00000521488 291 ntBASIC18.6■□□□□ 0.57
APOC1P02654 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.6■□□□□ 0.57
APOC1P02654 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOC1P02654 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOC1P02654 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOC1P02654 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
APOC1P02654 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOC1P02654 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
APOC1P02654 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOC1P02654 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
APOC1P02654 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOC1P02654 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOC1P02654 AC007375.3-201ENST00000600936 2314 ntBASIC18.59■□□□□ 0.57
APOC1P02654 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.59■□□□□ 0.57
APOC1P02654 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
APOC1P02654 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.59■□□□□ 0.57
APOC1P02654 AC133561.4-201ENST00000566112 224 ntBASIC18.59■□□□□ 0.57
APOC1P02654 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.59■□□□□ 0.57
APOC1P02654 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOC1P02654 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APOC1P02654 Z98882.1-201ENST00000622160 2253 ntBASIC18.58■□□□□ 0.57
APOC1P02654 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
APOC1P02654 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APOC1P02654 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APOC1P02654 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
APOC1P02654 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.58■□□□□ 0.57
APOC1P02654 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOC1P02654 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APOC1P02654 AC027682.1-201ENST00000562846 899 ntBASIC18.58■□□□□ 0.56
APOC1P02654 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APOC1P02654 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOC1P02654 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOC1P02654 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APOC1P02654 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.58■□□□□ 0.56
APOC1P02654 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.58■□□□□ 0.56
APOC1P02654 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.58■□□□□ 0.56
APOC1P02654 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOC1P02654 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOC1P02654 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC1P02654 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC1P02654 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.57■□□□□ 0.56
APOC1P02654 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.57■□□□□ 0.56
APOC1P02654 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC1P02654 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC1P02654 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APOC1P02654 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.57■□□□□ 0.56
APOC1P02654 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.57■□□□□ 0.56
APOC1P02654 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.57■□□□□ 0.56
APOC1P02654 AC026310.3-201ENST00000625186 2373 ntBASIC18.57■□□□□ 0.56
APOC1P02654 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC1P02654 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC1P02654 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.57■□□□□ 0.56
APOC1P02654 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.57■□□□□ 0.56
APOC1P02654 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
APOC1P02654 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.56■□□□□ 0.56
APOC1P02654 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
APOC1P02654 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 EDA-201ENST00000338901 1233 ntBASIC18.56■□□□□ 0.56
APOC1P02654 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.56■□□□□ 0.56
APOC1P02654 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.56■□□□□ 0.56
APOC1P02654 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APOC1P02654 PBX2P1-201ENST00000493219 1291 ntBASIC18.56■□□□□ 0.56
APOC1P02654 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms