Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.42■□□□□ 0.38
TGFAP01135 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TGFAP01135 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TGFAP01135 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TGFAP01135 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
TGFAP01135 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TGFAP01135 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TGFAP01135 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
TGFAP01135 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.41■□□□□ 0.38
TGFAP01135 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.41■□□□□ 0.38
TGFAP01135 AC097658.1-201ENST00000475555 843 ntBASIC17.41■□□□□ 0.38
TGFAP01135 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.41■□□□□ 0.38
TGFAP01135 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.41■□□□□ 0.38
TGFAP01135 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.41■□□□□ 0.38
TGFAP01135 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.41■□□□□ 0.38
TGFAP01135 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TGFAP01135 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TGFAP01135 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TGFAP01135 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.41■□□□□ 0.38
TGFAP01135 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TGFAP01135 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TGFAP01135 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TGFAP01135 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.4■□□□□ 0.38
TGFAP01135 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.4■□□□□ 0.38
TGFAP01135 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TGFAP01135 AL591742.1-201ENST00000604433 565 ntBASIC17.4■□□□□ 0.38
TGFAP01135 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.4■□□□□ 0.38
TGFAP01135 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.4■□□□□ 0.38
TGFAP01135 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TGFAP01135 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TGFAP01135 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
TGFAP01135 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TGFAP01135 AC137767.1-201ENST00000602918 1920 ntBASIC17.39■□□□□ 0.37
TGFAP01135 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TGFAP01135 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TGFAP01135 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TGFAP01135 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.39■□□□□ 0.37
TGFAP01135 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TGFAP01135 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TGFAP01135 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TGFAP01135 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TGFAP01135 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TGFAP01135 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TGFAP01135 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TGFAP01135 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.39■□□□□ 0.37
TGFAP01135 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TGFAP01135 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TGFAP01135 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.39■□□□□ 0.37
TGFAP01135 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TGFAP01135 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TGFAP01135 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TGFAP01135 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TGFAP01135 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TGFAP01135 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TGFAP01135 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.38■□□□□ 0.37
TGFAP01135 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.38■□□□□ 0.37
TGFAP01135 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.38■□□□□ 0.37
TGFAP01135 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.38■□□□□ 0.37
TGFAP01135 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.38■□□□□ 0.37
TGFAP01135 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TGFAP01135 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TGFAP01135 KRT16P2-201ENST00000414673 1423 ntBASIC17.38■□□□□ 0.37
TGFAP01135 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TGFAP01135 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TGFAP01135 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TGFAP01135 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.37■□□□□ 0.37
TGFAP01135 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TGFAP01135 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.37■□□□□ 0.37
TGFAP01135 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms