Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.16■■□□□ 1.3
TIMP1P01033 RPPH1-201ENST00000516869 333 ntBASIC23.16■■□□□ 1.3
TIMP1P01033 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.16■■□□□ 1.3
TIMP1P01033 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.16■■□□□ 1.3
TIMP1P01033 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.16■■□□□ 1.3
TIMP1P01033 AC060766.5-201ENST00000590539 871 ntBASIC23.16■■□□□ 1.3
TIMP1P01033 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.16■■□□□ 1.3
TIMP1P01033 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.16■■□□□ 1.3
TIMP1P01033 FAM197Y4-202ENST00000622692 608 ntBASIC23.16■■□□□ 1.3
TIMP1P01033 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TIMP1P01033 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.16■■□□□ 1.3
TIMP1P01033 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TIMP1P01033 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TIMP1P01033 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TIMP1P01033 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TIMP1P01033 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TIMP1P01033 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TIMP1P01033 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TIMP1P01033 KRT17P1-201ENST00000399211 1546 ntBASIC23.15■■□□□ 1.3
TIMP1P01033 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.15■■□□□ 1.3
TIMP1P01033 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TIMP1P01033 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.15■■□□□ 1.3
TIMP1P01033 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.15■■□□□ 1.3
TIMP1P01033 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.15■■□□□ 1.3
TIMP1P01033 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TIMP1P01033 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TIMP1P01033 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TIMP1P01033 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TIMP1P01033 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TIMP1P01033 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
TIMP1P01033 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.14■■□□□ 1.29
TIMP1P01033 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.14■■□□□ 1.29
TIMP1P01033 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TIMP1P01033 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TIMP1P01033 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.14■■□□□ 1.29
TIMP1P01033 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
TIMP1P01033 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TIMP1P01033 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.14■■□□□ 1.29
TIMP1P01033 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TIMP1P01033 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.14■■□□□ 1.29
TIMP1P01033 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TIMP1P01033 HLA-B-256ENST00000639848 1089 ntBASIC23.14■■□□□ 1.29
TIMP1P01033 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.14■■□□□ 1.29
TIMP1P01033 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TIMP1P01033 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.14■■□□□ 1.29
TIMP1P01033 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TIMP1P01033 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TIMP1P01033 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TIMP1P01033 AL355472.2-201ENST00000422958 438 ntBASIC23.13■■□□□ 1.29
TIMP1P01033 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.13■■□□□ 1.29
TIMP1P01033 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TIMP1P01033 C1QBPP2-201ENST00000528754 825 ntBASIC23.13■■□□□ 1.29
TIMP1P01033 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TIMP1P01033 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 MIR1224-201ENST00000408193 85 ntBASIC23.12■■□□□ 1.29
TIMP1P01033 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.12■■□□□ 1.29
TIMP1P01033 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 FAM210CP-201ENST00000445714 574 ntBASIC23.12■■□□□ 1.29
TIMP1P01033 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.12■■□□□ 1.29
TIMP1P01033 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
TIMP1P01033 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.12■■□□□ 1.29
TIMP1P01033 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TIMP1P01033 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIMP1P01033 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIMP1P01033 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.11■■□□□ 1.29
TIMP1P01033 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIMP1P01033 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
TIMP1P01033 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIMP1P01033 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.11■■□□□ 1.29
TIMP1P01033 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.11■■□□□ 1.29
TIMP1P01033 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.11■■□□□ 1.29
TIMP1P01033 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.11■■□□□ 1.29
TIMP1P01033 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TIMP1P01033 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TIMP1P01033 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TIMP1P01033 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TIMP1P01033 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
TIMP1P01033 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TIMP1P01033 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.1■■□□□ 1.29
TIMP1P01033 AC211429.1-201ENST00000415277 523 ntBASIC23.1■■□□□ 1.29
TIMP1P01033 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TIMP1P01033 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.1■■□□□ 1.29
TIMP1P01033 CYP2T3P-201ENST00000601990 817 ntBASIC23.1■■□□□ 1.29
TIMP1P01033 Z99916.2-201ENST00000604037 246 ntBASIC23.1■■□□□ 1.29
TIMP1P01033 REXO1L12P-201ENST00000622156 912 ntBASIC23.1■■□□□ 1.29
TIMP1P01033 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TIMP1P01033 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TIMP1P01033 AC061975.6-201ENST00000579045 1553 ntBASIC23.1■■□□□ 1.29
TIMP1P01033 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.09■■□□□ 1.29
TIMP1P01033 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms