Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GGPS1O95749 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GGPS1O95749 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.82■■□□□ 1.4
GGPS1O95749 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.82■■□□□ 1.4
GGPS1O95749 AC142086.2-201ENST00000569753 217 ntBASIC23.82■■□□□ 1.4
GGPS1O95749 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.82■■□□□ 1.4
GGPS1O95749 AC127496.7-201ENST00000625110 1798 ntBASIC23.82■■□□□ 1.4
GGPS1O95749 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
GGPS1O95749 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GGPS1O95749 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GGPS1O95749 AC003102.1-202ENST00000563394 1796 ntBASIC23.81■■□□□ 1.4
GGPS1O95749 AL117328.2-201ENST00000624617 1940 ntBASIC23.81■■□□□ 1.4
GGPS1O95749 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.81■■□□□ 1.4
GGPS1O95749 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GGPS1O95749 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GGPS1O95749 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
GGPS1O95749 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
GGPS1O95749 AC120498.10-201ENST00000621827 505 ntBASIC23.81■■□□□ 1.4
GGPS1O95749 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GGPS1O95749 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
GGPS1O95749 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.81■■□□□ 1.4
GGPS1O95749 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.81■■□□□ 1.4
GGPS1O95749 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
GGPS1O95749 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GGPS1O95749 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GGPS1O95749 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GGPS1O95749 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
GGPS1O95749 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.8■■□□□ 1.4
GGPS1O95749 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
GGPS1O95749 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GGPS1O95749 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GGPS1O95749 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.8■■□□□ 1.4
GGPS1O95749 POU5F1P4-201ENST00000413175 1085 ntBASIC23.8■■□□□ 1.4
GGPS1O95749 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
GGPS1O95749 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.8■■□□□ 1.4
GGPS1O95749 AF201337.1-201ENST00000520239 748 ntBASIC23.8■■□□□ 1.4
GGPS1O95749 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
GGPS1O95749 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
GGPS1O95749 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GGPS1O95749 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.8■■□□□ 1.4
GGPS1O95749 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GGPS1O95749 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.79■■□□□ 1.4
GGPS1O95749 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
GGPS1O95749 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
GGPS1O95749 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
GGPS1O95749 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.79■■□□□ 1.4
GGPS1O95749 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
GGPS1O95749 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
GGPS1O95749 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.79■■□□□ 1.4
GGPS1O95749 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
GGPS1O95749 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.79■■□□□ 1.4
GGPS1O95749 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GGPS1O95749 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GGPS1O95749 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
GGPS1O95749 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
GGPS1O95749 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
GGPS1O95749 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GGPS1O95749 AC068338.2-201ENST00000563278 1430 ntBASIC23.78■■□□□ 1.4
GGPS1O95749 SLC29A4P1-201ENST00000398760 971 ntBASIC23.78■■□□□ 1.4
GGPS1O95749 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.78■■□□□ 1.4
GGPS1O95749 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.78■■□□□ 1.4
GGPS1O95749 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
GGPS1O95749 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.78■■□□□ 1.4
GGPS1O95749 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
GGPS1O95749 AL138781.1-201ENST00000566567 1274 ntBASIC23.78■■□□□ 1.4
GGPS1O95749 AC105036.2-201ENST00000569468 176 ntBASIC23.78■■□□□ 1.4
GGPS1O95749 AC133552.2-202ENST00000575694 574 ntBASIC23.78■■□□□ 1.4
GGPS1O95749 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.78■■□□□ 1.4
GGPS1O95749 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GGPS1O95749 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
GGPS1O95749 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
GGPS1O95749 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
GGPS1O95749 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
GGPS1O95749 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.78■■□□□ 1.4
GGPS1O95749 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.77■■□□□ 1.4
GGPS1O95749 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
GGPS1O95749 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GGPS1O95749 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GGPS1O95749 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GGPS1O95749 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GGPS1O95749 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GGPS1O95749 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.77■■□□□ 1.4
GGPS1O95749 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GGPS1O95749 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
GGPS1O95749 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.39
GGPS1O95749 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GGPS1O95749 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.76■■□□□ 1.39
GGPS1O95749 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.76■■□□□ 1.39
GGPS1O95749 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GGPS1O95749 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GGPS1O95749 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GGPS1O95749 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
GGPS1O95749 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GGPS1O95749 CYP2T1P-201ENST00000432607 1285 ntBASIC23.76■■□□□ 1.39
GGPS1O95749 AC007322.4-201ENST00000509611 723 ntBASIC23.76■■□□□ 1.39
GGPS1O95749 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.76■■□□□ 1.39
GGPS1O95749 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.76■■□□□ 1.39
GGPS1O95749 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GGPS1O95749 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.76■■□□□ 1.39
GGPS1O95749 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms