Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.35■■□□□ 1.01
USP1O94782 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
USP1O94782 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP1O94782 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP1O94782 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
USP1O94782 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP1O94782 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP1O94782 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.34■■□□□ 1.01
USP1O94782 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP1O94782 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.34■■□□□ 1.01
USP1O94782 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.34■■□□□ 1.01
USP1O94782 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP1O94782 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP1O94782 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
USP1O94782 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
USP1O94782 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP1O94782 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP1O94782 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.34■■□□□ 1.01
USP1O94782 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
USP1O94782 AC110285.6-201ENST00000617652 491 ntBASIC21.34■■□□□ 1.01
USP1O94782 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.34■■□□□ 1.01
USP1O94782 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.34■■□□□ 1.01
USP1O94782 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
USP1O94782 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
USP1O94782 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
USP1O94782 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP1O94782 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.34■■□□□ 1.01
USP1O94782 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP1O94782 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP1O94782 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP1O94782 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
USP1O94782 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP1O94782 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
USP1O94782 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP1O94782 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.33■■□□□ 1.01
USP1O94782 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
USP1O94782 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.33■■□□□ 1.01
USP1O94782 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP1O94782 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP1O94782 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.33■■□□□ 1.01
USP1O94782 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.33■■□□□ 1.01
USP1O94782 AC106739.1-201ENST00000617035 715 ntBASIC21.33■■□□□ 1.01
USP1O94782 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.33■■□□□ 1
USP1O94782 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.33■■□□□ 1
USP1O94782 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP1O94782 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP1O94782 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.32■■□□□ 1
USP1O94782 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.32■■□□□ 1
USP1O94782 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.32■■□□□ 1
USP1O94782 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.32■■□□□ 1
USP1O94782 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.32■■□□□ 1
USP1O94782 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP1O94782 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
USP1O94782 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
USP1O94782 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
USP1O94782 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.31■■□□□ 1
USP1O94782 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.31■■□□□ 1
USP1O94782 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.31■■□□□ 1
USP1O94782 AC008764.7-201ENST00000593779 1081 ntBASIC21.31■■□□□ 1
USP1O94782 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.31■■□□□ 1
USP1O94782 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.31■■□□□ 1
USP1O94782 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
USP1O94782 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
USP1O94782 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
USP1O94782 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP1O94782 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP1O94782 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.3■■□□□ 1
USP1O94782 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
USP1O94782 AC099791.1-201ENST00000416440 715 ntBASIC21.3■■□□□ 1
USP1O94782 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.3■■□□□ 1
USP1O94782 AC027682.1-201ENST00000562846 899 ntBASIC21.3■■□□□ 1
USP1O94782 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.3■■□□□ 1
USP1O94782 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.3■■□□□ 1
USP1O94782 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.3■■□□□ 1
USP1O94782 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP1O94782 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.3■■□□□ 1
USP1O94782 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP1O94782 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.29■■□□□ 1
USP1O94782 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP1O94782 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
USP1O94782 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
USP1O94782 AL121603.2-201ENST00000557373 2117 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms