Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
BEST1O76090 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
BEST1O76090 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.3■■□□□ 1.16
BEST1O76090 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.3■■□□□ 1.16
BEST1O76090 AC011767.1-201ENST00000617410 1153 ntBASIC22.3■■□□□ 1.16
BEST1O76090 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
BEST1O76090 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
BEST1O76090 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
BEST1O76090 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.3■■□□□ 1.16
BEST1O76090 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
BEST1O76090 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.29■■□□□ 1.16
BEST1O76090 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.29■■□□□ 1.16
BEST1O76090 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.29■■□□□ 1.16
BEST1O76090 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.29■■□□□ 1.16
BEST1O76090 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.29■■□□□ 1.16
BEST1O76090 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.29■■□□□ 1.16
BEST1O76090 RARRES2P11-201ENST00000635158 484 ntBASIC22.29■■□□□ 1.16
BEST1O76090 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.29■■□□□ 1.16
BEST1O76090 AC061975.6-201ENST00000579045 1553 ntBASIC22.29■■□□□ 1.16
BEST1O76090 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
BEST1O76090 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
BEST1O76090 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.28■■□□□ 1.16
BEST1O76090 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
BEST1O76090 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
BEST1O76090 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.28■■□□□ 1.16
BEST1O76090 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.28■■□□□ 1.16
BEST1O76090 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.28■■□□□ 1.16
BEST1O76090 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BEST1O76090 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.28■■□□□ 1.16
BEST1O76090 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
BEST1O76090 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
BEST1O76090 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
BEST1O76090 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BEST1O76090 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BEST1O76090 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BEST1O76090 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.27■■□□□ 1.16
BEST1O76090 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.27■■□□□ 1.16
BEST1O76090 MFSD11-216ENST00000590393 1141 ntBASIC22.27■■□□□ 1.16
BEST1O76090 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
BEST1O76090 AC080038.1-201ENST00000611274 1154 ntBASIC22.27■■□□□ 1.16
BEST1O76090 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BEST1O76090 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.27■■□□□ 1.16
BEST1O76090 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.27■■□□□ 1.15
BEST1O76090 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.27■■□□□ 1.15
BEST1O76090 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
BEST1O76090 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
BEST1O76090 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
BEST1O76090 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.26■■□□□ 1.15
BEST1O76090 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.26■■□□□ 1.15
BEST1O76090 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.26■■□□□ 1.15
BEST1O76090 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.26■■□□□ 1.15
BEST1O76090 BID-214ENST00000617586 542 ntTSL 5 BASIC22.26■■□□□ 1.15
BEST1O76090 MYCNOS-205ENST00000641950 531 ntBASIC22.26■■□□□ 1.15
BEST1O76090 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
BEST1O76090 FBXW4P1-201ENST00000426721 2239 ntBASIC22.26■■□□□ 1.15
BEST1O76090 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.25■■□□□ 1.15
BEST1O76090 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BEST1O76090 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.25■■□□□ 1.15
BEST1O76090 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.25■■□□□ 1.15
BEST1O76090 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BEST1O76090 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BEST1O76090 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.25■■□□□ 1.15
BEST1O76090 KRT18P11-201ENST00000435214 1283 ntBASIC22.25■■□□□ 1.15
BEST1O76090 KRT18P20-201ENST00000548986 1279 ntBASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms