Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC003102.1-202ENST00000563394 1796 ntBASIC21.21■□□□□ 0.99
RFPL1O75677 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.21■□□□□ 0.99
RFPL1O75677 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.21■□□□□ 0.99
RFPL1O75677 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.21■□□□□ 0.99
RFPL1O75677 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.21■□□□□ 0.99
RFPL1O75677 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.21■□□□□ 0.99
RFPL1O75677 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.21■□□□□ 0.99
RFPL1O75677 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RFPL1O75677 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFPL1O75677 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
RFPL1O75677 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFPL1O75677 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.2■□□□□ 0.98
RFPL1O75677 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFPL1O75677 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.2■□□□□ 0.98
RFPL1O75677 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.2■□□□□ 0.98
RFPL1O75677 AC008764.7-201ENST00000593779 1081 ntBASIC21.2■□□□□ 0.98
RFPL1O75677 AC087623.3-201ENST00000607047 1098 ntBASIC21.2■□□□□ 0.98
RFPL1O75677 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RFPL1O75677 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RFPL1O75677 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFPL1O75677 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
RFPL1O75677 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFPL1O75677 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
RFPL1O75677 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RFPL1O75677 AL049796.1-201ENST00000565336 1766 ntBASIC21.2■□□□□ 0.98
RFPL1O75677 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.2■□□□□ 0.98
RFPL1O75677 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFPL1O75677 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFPL1O75677 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFPL1O75677 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFPL1O75677 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFPL1O75677 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.19■□□□□ 0.98
RFPL1O75677 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFPL1O75677 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFPL1O75677 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.19■□□□□ 0.98
RFPL1O75677 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.19■□□□□ 0.98
RFPL1O75677 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.19■□□□□ 0.98
RFPL1O75677 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.19■□□□□ 0.98
RFPL1O75677 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RFPL1O75677 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFPL1O75677 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFPL1O75677 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.19■□□□□ 0.98
RFPL1O75677 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RFPL1O75677 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RFPL1O75677 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL1O75677 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RFPL1O75677 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.18■□□□□ 0.98
RFPL1O75677 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.18■□□□□ 0.98
RFPL1O75677 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL1O75677 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL1O75677 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RFPL1O75677 IRS3P-201ENST00000223076 1006 ntBASIC21.18■□□□□ 0.98
RFPL1O75677 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL1O75677 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL1O75677 AL162430.1-201ENST00000480705 870 ntBASIC21.18■□□□□ 0.98
RFPL1O75677 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL1O75677 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.18■□□□□ 0.98
RFPL1O75677 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.18■□□□□ 0.98
RFPL1O75677 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL1O75677 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL1O75677 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
RFPL1O75677 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
RFPL1O75677 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFPL1O75677 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RFPL1O75677 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RFPL1O75677 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL1O75677 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL1O75677 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL1O75677 AC099791.1-201ENST00000416440 715 ntBASIC21.17■□□□□ 0.98
RFPL1O75677 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.17■□□□□ 0.98
RFPL1O75677 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL1O75677 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL1O75677 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL1O75677 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RFPL1O75677 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL1O75677 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL1O75677 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.17■□□□□ 0.98
RFPL1O75677 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFPL1O75677 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL1O75677 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.16■□□□□ 0.98
RFPL1O75677 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL1O75677 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.16■□□□□ 0.98
RFPL1O75677 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.16■□□□□ 0.98
RFPL1O75677 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.16■□□□□ 0.98
RFPL1O75677 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL1O75677 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL1O75677 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.16■□□□□ 0.98
RFPL1O75677 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL1O75677 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFPL1O75677 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.15■□□□□ 0.98
RFPL1O75677 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL1O75677 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RFPL1O75677 LINC01006-201ENST00000333319 2292 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms