Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.85■□□□□ 0.93
GFRA3O60609 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.85■□□□□ 0.93
GFRA3O60609 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
GFRA3O60609 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GFRA3O60609 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
GFRA3O60609 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.85■□□□□ 0.93
GFRA3O60609 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GFRA3O60609 RBM17P2-201ENST00000616397 1405 ntBASIC20.85■□□□□ 0.93
GFRA3O60609 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GFRA3O60609 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GFRA3O60609 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
GFRA3O60609 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.84■□□□□ 0.93
GFRA3O60609 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.84■□□□□ 0.93
GFRA3O60609 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.84■□□□□ 0.93
GFRA3O60609 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GFRA3O60609 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.84■□□□□ 0.93
GFRA3O60609 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
GFRA3O60609 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.84■□□□□ 0.93
GFRA3O60609 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.84■□□□□ 0.93
GFRA3O60609 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
GFRA3O60609 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.84■□□□□ 0.93
GFRA3O60609 NTF6B-201ENST00000591913 560 ntBASIC20.84■□□□□ 0.93
GFRA3O60609 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.84■□□□□ 0.93
GFRA3O60609 AC124016.1-201ENST00000609552 612 ntBASIC20.84■□□□□ 0.93
GFRA3O60609 AC008175.2-201ENST00000612840 297 ntBASIC20.84■□□□□ 0.93
GFRA3O60609 MIR6786-201ENST00000616843 113 ntBASIC20.84■□□□□ 0.93
GFRA3O60609 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.84■□□□□ 0.93
GFRA3O60609 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.84■□□□□ 0.93
GFRA3O60609 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
GFRA3O60609 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
GFRA3O60609 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GFRA3O60609 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GFRA3O60609 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.83■□□□□ 0.93
GFRA3O60609 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GFRA3O60609 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GFRA3O60609 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
GFRA3O60609 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.83■□□□□ 0.93
GFRA3O60609 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.83■□□□□ 0.93
GFRA3O60609 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
GFRA3O60609 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GFRA3O60609 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.83■□□□□ 0.93
GFRA3O60609 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GFRA3O60609 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
GFRA3O60609 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.83■□□□□ 0.93
GFRA3O60609 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.83■□□□□ 0.93
GFRA3O60609 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.83■□□□□ 0.93
GFRA3O60609 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.83■□□□□ 0.92
GFRA3O60609 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.82■□□□□ 0.92
GFRA3O60609 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.82■□□□□ 0.92
GFRA3O60609 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.82■□□□□ 0.92
GFRA3O60609 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
GFRA3O60609 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.82■□□□□ 0.92
GFRA3O60609 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.82■□□□□ 0.92
GFRA3O60609 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
GFRA3O60609 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.82■□□□□ 0.92
GFRA3O60609 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA3O60609 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.82■□□□□ 0.92
GFRA3O60609 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.82■□□□□ 0.92
GFRA3O60609 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.81■□□□□ 0.92
GFRA3O60609 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA3O60609 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA3O60609 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA3O60609 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA3O60609 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.81■□□□□ 0.92
GFRA3O60609 KRT18P57-201ENST00000443599 1254 ntBASIC20.81■□□□□ 0.92
GFRA3O60609 AC133681.1-201ENST00000465482 601 ntBASIC20.81■□□□□ 0.92
GFRA3O60609 AC145285.6-201ENST00000604632 637 ntBASIC20.81■□□□□ 0.92
GFRA3O60609 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.81■□□□□ 0.92
GFRA3O60609 AL023875.1-201ENST00000640777 796 ntBASIC20.81■□□□□ 0.92
GFRA3O60609 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA3O60609 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA3O60609 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GFRA3O60609 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GFRA3O60609 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GFRA3O60609 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.8■□□□□ 0.92
GFRA3O60609 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GFRA3O60609 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.8■□□□□ 0.92
GFRA3O60609 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
GFRA3O60609 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.8■□□□□ 0.92
GFRA3O60609 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GFRA3O60609 AC239809.2-201ENST00000415381 517 ntBASIC20.8■□□□□ 0.92
GFRA3O60609 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
GFRA3O60609 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.8■□□□□ 0.92
GFRA3O60609 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GFRA3O60609 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GFRA3O60609 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.79■□□□□ 0.92
GFRA3O60609 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
GFRA3O60609 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFRA3O60609 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFRA3O60609 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.79■□□□□ 0.92
GFRA3O60609 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms