Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.1■□□□□ 0.65
ZIC3O60481 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.1■□□□□ 0.65
ZIC3O60481 SLC7A5P2-201ENST00000553010 536 ntBASIC19.1■□□□□ 0.65
ZIC3O60481 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.1■□□□□ 0.65
ZIC3O60481 UBE2DNL-204ENST00000602536 740 ntBASIC19.1■□□□□ 0.65
ZIC3O60481 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.1■□□□□ 0.65
ZIC3O60481 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZIC3O60481 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
ZIC3O60481 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZIC3O60481 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZIC3O60481 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.09■□□□□ 0.65
ZIC3O60481 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZIC3O60481 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZIC3O60481 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZIC3O60481 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZIC3O60481 AC008175.2-201ENST00000612840 297 ntBASIC19.09■□□□□ 0.65
ZIC3O60481 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZIC3O60481 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZIC3O60481 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZIC3O60481 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.09■□□□□ 0.65
ZIC3O60481 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.09■□□□□ 0.65
ZIC3O60481 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZIC3O60481 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ZIC3O60481 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.09■□□□□ 0.65
ZIC3O60481 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
ZIC3O60481 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZIC3O60481 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.08■□□□□ 0.65
ZIC3O60481 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZIC3O60481 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.08■□□□□ 0.64
ZIC3O60481 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ZIC3O60481 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ZIC3O60481 POU5F1P4-201ENST00000413175 1085 ntBASIC19.08■□□□□ 0.64
ZIC3O60481 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.08■□□□□ 0.64
ZIC3O60481 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.08■□□□□ 0.64
ZIC3O60481 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.08■□□□□ 0.64
ZIC3O60481 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.08■□□□□ 0.64
ZIC3O60481 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.08■□□□□ 0.64
ZIC3O60481 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ZIC3O60481 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZIC3O60481 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZIC3O60481 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZIC3O60481 AC061975.6-201ENST00000579045 1553 ntBASIC19.07■□□□□ 0.64
ZIC3O60481 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZIC3O60481 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.07■□□□□ 0.64
ZIC3O60481 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.07■□□□□ 0.64
ZIC3O60481 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ZIC3O60481 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.07■□□□□ 0.64
ZIC3O60481 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.07■□□□□ 0.64
ZIC3O60481 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZIC3O60481 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.07■□□□□ 0.64
ZIC3O60481 BID-214ENST00000617586 542 ntTSL 5 BASIC19.07■□□□□ 0.64
ZIC3O60481 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
ZIC3O60481 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZIC3O60481 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.07■□□□□ 0.64
ZIC3O60481 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.07■□□□□ 0.64
ZIC3O60481 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ZIC3O60481 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.07■□□□□ 0.64
ZIC3O60481 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ZIC3O60481 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZIC3O60481 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZIC3O60481 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZIC3O60481 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.06■□□□□ 0.64
ZIC3O60481 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ZIC3O60481 SLC7A5P1-201ENST00000568957 537 ntBASIC19.06■□□□□ 0.64
ZIC3O60481 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZIC3O60481 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZIC3O60481 AC080038.1-201ENST00000611274 1154 ntBASIC19.06■□□□□ 0.64
ZIC3O60481 AC011767.1-201ENST00000617410 1153 ntBASIC19.06■□□□□ 0.64
ZIC3O60481 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.06■□□□□ 0.64
ZIC3O60481 MYCNOS-205ENST00000641950 531 ntBASIC19.06■□□□□ 0.64
ZIC3O60481 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZIC3O60481 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.06■□□□□ 0.64
ZIC3O60481 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
ZIC3O60481 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
ZIC3O60481 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.06■□□□□ 0.64
ZIC3O60481 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.06■□□□□ 0.64
ZIC3O60481 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZIC3O60481 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZIC3O60481 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZIC3O60481 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms