Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC25.35■■□□□ 1.65
FOXN1O15353 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.35■■□□□ 1.65
FOXN1O15353 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
FOXN1O15353 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
FOXN1O15353 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
FOXN1O15353 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
FOXN1O15353 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
FOXN1O15353 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
FOXN1O15353 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
FOXN1O15353 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.34■■□□□ 1.65
FOXN1O15353 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
FOXN1O15353 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.34■■□□□ 1.65
FOXN1O15353 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.34■■□□□ 1.65
FOXN1O15353 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.34■■□□□ 1.65
FOXN1O15353 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.34■■□□□ 1.65
FOXN1O15353 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC25.34■■□□□ 1.65
FOXN1O15353 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
FOXN1O15353 AC079630.1-202ENST00000618127 1840 ntBASIC25.34■■□□□ 1.65
FOXN1O15353 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
FOXN1O15353 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
FOXN1O15353 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
FOXN1O15353 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FOXN1O15353 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
FOXN1O15353 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.33■■□□□ 1.65
FOXN1O15353 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
FOXN1O15353 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
FOXN1O15353 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FOXN1O15353 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
FOXN1O15353 BX276092.2-201ENST00000417668 665 ntBASIC25.33■■□□□ 1.65
FOXN1O15353 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
FOXN1O15353 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
FOXN1O15353 AC093787.1-201ENST00000450396 207 ntBASIC25.33■■□□□ 1.65
FOXN1O15353 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.33■■□□□ 1.65
FOXN1O15353 INO80E-214ENST00000620599 515 ntTSL 2 BASIC25.33■■□□□ 1.65
FOXN1O15353 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.33■■□□□ 1.65
FOXN1O15353 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
FOXN1O15353 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXN1O15353 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
FOXN1O15353 AC068338.2-201ENST00000563278 1430 ntBASIC25.32■■□□□ 1.64
FOXN1O15353 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
FOXN1O15353 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.32■■□□□ 1.64
FOXN1O15353 Z99916.2-201ENST00000604037 246 ntBASIC25.32■■□□□ 1.64
FOXN1O15353 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.32■■□□□ 1.64
FOXN1O15353 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
FOXN1O15353 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
FOXN1O15353 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.32■■□□□ 1.64
FOXN1O15353 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.32■■□□□ 1.64
FOXN1O15353 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.32■■□□□ 1.64
FOXN1O15353 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN1O15353 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN1O15353 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN1O15353 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.31■■□□□ 1.64
FOXN1O15353 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.31■■□□□ 1.64
FOXN1O15353 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.31■■□□□ 1.64
FOXN1O15353 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.31■■□□□ 1.64
FOXN1O15353 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN1O15353 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN1O15353 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN1O15353 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN1O15353 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.31■■□□□ 1.64
FOXN1O15353 FP325331.1-202ENST00000623531 1380 ntBASIC25.31■■□□□ 1.64
FOXN1O15353 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
FOXN1O15353 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN1O15353 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN1O15353 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN1O15353 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
FOXN1O15353 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN1O15353 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.3■■□□□ 1.64
FOXN1O15353 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.3■■□□□ 1.64
FOXN1O15353 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
FOXN1O15353 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN1O15353 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.3■■□□□ 1.64
FOXN1O15353 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.3■■□□□ 1.64
FOXN1O15353 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.3■■□□□ 1.64
FOXN1O15353 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN1O15353 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN1O15353 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
FOXN1O15353 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.29■■□□□ 1.64
FOXN1O15353 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
FOXN1O15353 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.29■■□□□ 1.64
FOXN1O15353 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.29■■□□□ 1.64
FOXN1O15353 AP003097.1-201ENST00000530657 1135 ntBASIC25.29■■□□□ 1.64
FOXN1O15353 BX088651.1-201ENST00000540551 451 ntBASIC25.29■■□□□ 1.64
FOXN1O15353 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms