Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 OR7E47P-201ENST00000546390 1422 ntBASIC20.16■□□□□ 0.82
PCDH17O14917 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PCDH17O14917 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH17O14917 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH17O14917 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH17O14917 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH17O14917 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDH17O14917 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH17O14917 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
PCDH17O14917 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH17O14917 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH17O14917 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDH17O14917 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDH17O14917 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH17O14917 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH17O14917 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH17O14917 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH17O14917 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH17O14917 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH17O14917 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH17O14917 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
PCDH17O14917 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PCDH17O14917 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.14■□□□□ 0.82
PCDH17O14917 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH17O14917 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PCDH17O14917 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH17O14917 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH17O14917 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH17O14917 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH17O14917 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH17O14917 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH17O14917 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDH17O14917 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH17O14917 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDH17O14917 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDH17O14917 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDH17O14917 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH17O14917 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH17O14917 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH17O14917 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH17O14917 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH17O14917 AP004607.4-201ENST00000530158 1459 ntBASIC20.13■□□□□ 0.81
PCDH17O14917 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH17O14917 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDH17O14917 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH17O14917 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH17O14917 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH17O14917 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH17O14917 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH17O14917 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH17O14917 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH17O14917 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH17O14917 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDH17O14917 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH17O14917 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH17O14917 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH17O14917 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH17O14917 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.12■□□□□ 0.81
PCDH17O14917 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH17O14917 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH17O14917 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH17O14917 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDH17O14917 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDH17O14917 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDH17O14917 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH17O14917 KRT87P-202ENST00000534226 1464 ntBASIC20.11■□□□□ 0.81
PCDH17O14917 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH17O14917 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH17O14917 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH17O14917 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH17O14917 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH17O14917 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH17O14917 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH17O14917 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH17O14917 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH17O14917 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCDH17O14917 KRT18P11-201ENST00000435214 1283 ntBASIC20.11■□□□□ 0.81
PCDH17O14917 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH17O14917 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH17O14917 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH17O14917 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.11■□□□□ 0.81
PCDH17O14917 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH17O14917 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH17O14917 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH17O14917 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDH17O14917 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDH17O14917 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDH17O14917 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH17O14917 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH17O14917 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH17O14917 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PCDH17O14917 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PCDH17O14917 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PCDH17O14917 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDH17O14917 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDH17O14917 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH17O14917 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH17O14917 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH17O14917 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH17O14917 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms