Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 POU5F1P4-201ENST00000413175 1085 ntBASIC27.39■■□□□ 1.98
CHL1O00533 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC27.39■■□□□ 1.98
CHL1O00533 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.39■■□□□ 1.98
CHL1O00533 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHL1O00533 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
CHL1O00533 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHL1O00533 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CHL1O00533 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHL1O00533 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHL1O00533 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHL1O00533 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHL1O00533 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27.37■■□□□ 1.97
CHL1O00533 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC27.37■■□□□ 1.97
CHL1O00533 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHL1O00533 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC27.37■■□□□ 1.97
CHL1O00533 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.37■■□□□ 1.97
CHL1O00533 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CHL1O00533 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHL1O00533 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.37■■□□□ 1.97
CHL1O00533 AC008175.2-201ENST00000612840 297 ntBASIC27.37■■□□□ 1.97
CHL1O00533 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHL1O00533 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC27.37■■□□□ 1.97
CHL1O00533 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHL1O00533 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
CHL1O00533 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHL1O00533 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.36■■□□□ 1.97
CHL1O00533 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC27.36■■□□□ 1.97
CHL1O00533 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
CHL1O00533 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC27.36■■□□□ 1.97
CHL1O00533 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CHL1O00533 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
CHL1O00533 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC27.35■■□□□ 1.97
CHL1O00533 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHL1O00533 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHL1O00533 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.35■■□□□ 1.97
CHL1O00533 AC026185.1-201ENST00000445748 174 ntBASIC27.35■■□□□ 1.97
CHL1O00533 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.35■■□□□ 1.97
CHL1O00533 AC010536.3-201ENST00000620306 533 ntBASIC27.35■■□□□ 1.97
CHL1O00533 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHL1O00533 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHL1O00533 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CHL1O00533 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHL1O00533 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHL1O00533 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHL1O00533 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
CHL1O00533 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC27.34■■□□□ 1.97
CHL1O00533 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC27.34■■□□□ 1.97
CHL1O00533 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC27.34■■□□□ 1.97
CHL1O00533 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHL1O00533 CROCCP5-201ENST00000436658 830 ntBASIC27.34■■□□□ 1.97
CHL1O00533 CNN2P6-201ENST00000439038 900 ntBASIC27.34■■□□□ 1.97
CHL1O00533 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC27.34■■□□□ 1.97
CHL1O00533 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.34■■□□□ 1.97
CHL1O00533 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC27.34■■□□□ 1.97
CHL1O00533 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHL1O00533 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC27.34■■□□□ 1.97
CHL1O00533 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHL1O00533 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHL1O00533 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
CHL1O00533 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHL1O00533 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHL1O00533 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
CHL1O00533 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CHL1O00533 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CHL1O00533 NARF-205ENST00000412079 1760 ntTSL 5 BASIC27.33■■□□□ 1.97
CHL1O00533 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC27.33■■□□□ 1.97
CHL1O00533 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CHL1O00533 KRT16P2-201ENST00000414673 1423 ntBASIC27.33■■□□□ 1.96
CHL1O00533 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.32■■□□□ 1.96
CHL1O00533 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
CHL1O00533 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHL1O00533 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHL1O00533 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHL1O00533 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC27.32■■□□□ 1.96
CHL1O00533 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHL1O00533 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.32■■□□□ 1.96
CHL1O00533 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.32■■□□□ 1.96
CHL1O00533 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
CHL1O00533 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.32■■□□□ 1.96
CHL1O00533 MDK-213ENST00000617138 635 ntTSL 2 BASIC27.32■■□□□ 1.96
CHL1O00533 MYB-221ENST00000527615 2381 ntTSL 5 BASIC27.32■■□□□ 1.96
CHL1O00533 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC27.32■■□□□ 1.96
CHL1O00533 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CHL1O00533 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHL1O00533 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CHL1O00533 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
CHL1O00533 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC27.31■■□□□ 1.96
CHL1O00533 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC27.31■■□□□ 1.96
CHL1O00533 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHL1O00533 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHL1O00533 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.31■■□□□ 1.96
CHL1O00533 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHL1O00533 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHL1O00533 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHL1O00533 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC27.31■■□□□ 1.96
CHL1O00533 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CHL1O00533 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC27.31■■□□□ 1.96
CHL1O00533 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
CHL1O00533 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CHL1O00533 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms