Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 DUX4L1-201ENST00000627662 1275 ntBASIC20.88■□□□□ 0.93
IFRD1O00458 DUX4L8-201ENST00000629013 1275 ntBASIC20.88■□□□□ 0.93
IFRD1O00458 DUX4L3-201ENST00000630187 1275 ntBASIC20.88■□□□□ 0.93
IFRD1O00458 DUX4L7-201ENST00000630678 1275 ntBASIC20.88■□□□□ 0.93
IFRD1O00458 DUX4L5-201ENST00000630834 1275 ntBASIC20.88■□□□□ 0.93
IFRD1O00458 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.88■□□□□ 0.93
IFRD1O00458 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.88■□□□□ 0.93
IFRD1O00458 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.88■□□□□ 0.93
IFRD1O00458 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.88■□□□□ 0.93
IFRD1O00458 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IFRD1O00458 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFRD1O00458 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.88■□□□□ 0.93
IFRD1O00458 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
IFRD1O00458 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.87■□□□□ 0.93
IFRD1O00458 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFRD1O00458 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFRD1O00458 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.87■□□□□ 0.93
IFRD1O00458 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.87■□□□□ 0.93
IFRD1O00458 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.87■□□□□ 0.93
IFRD1O00458 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IFRD1O00458 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
IFRD1O00458 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IFRD1O00458 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.86■□□□□ 0.93
IFRD1O00458 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.86■□□□□ 0.93
IFRD1O00458 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IFRD1O00458 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.86■□□□□ 0.93
IFRD1O00458 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IFRD1O00458 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IFRD1O00458 AC010542.4-201ENST00000563151 1910 ntBASIC20.86■□□□□ 0.93
IFRD1O00458 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IFRD1O00458 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IFRD1O00458 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
IFRD1O00458 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.85■□□□□ 0.93
IFRD1O00458 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IFRD1O00458 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.85■□□□□ 0.93
IFRD1O00458 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFRD1O00458 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.85■□□□□ 0.93
IFRD1O00458 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.85■□□□□ 0.93
IFRD1O00458 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
IFRD1O00458 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.85■□□□□ 0.93
IFRD1O00458 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.85■□□□□ 0.93
IFRD1O00458 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.85■□□□□ 0.93
IFRD1O00458 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
IFRD1O00458 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.85■□□□□ 0.93
IFRD1O00458 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.85■□□□□ 0.93
IFRD1O00458 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.85■□□□□ 0.93
IFRD1O00458 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFRD1O00458 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFRD1O00458 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFRD1O00458 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFRD1O00458 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFRD1O00458 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFRD1O00458 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IFRD1O00458 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IFRD1O00458 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.84■□□□□ 0.93
IFRD1O00458 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IFRD1O00458 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.84■□□□□ 0.93
IFRD1O00458 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IFRD1O00458 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
IFRD1O00458 FAM99A-202ENST00000538190 1989 ntBASIC20.84■□□□□ 0.93
IFRD1O00458 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IFRD1O00458 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IFRD1O00458 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IFRD1O00458 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
IFRD1O00458 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
IFRD1O00458 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
IFRD1O00458 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
IFRD1O00458 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.83■□□□□ 0.93
IFRD1O00458 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
IFRD1O00458 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IFRD1O00458 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
IFRD1O00458 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.83■□□□□ 0.93
IFRD1O00458 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IFRD1O00458 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
IFRD1O00458 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.83■□□□□ 0.92
IFRD1O00458 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IFRD1O00458 AL137060.1-201ENST00000618151 2648 ntBASIC20.83■□□□□ 0.92
IFRD1O00458 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.83■□□□□ 0.92
IFRD1O00458 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.83■□□□□ 0.92
IFRD1O00458 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.83■□□□□ 0.92
IFRD1O00458 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.83■□□□□ 0.92
IFRD1O00458 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
IFRD1O00458 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
IFRD1O00458 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.82■□□□□ 0.92
IFRD1O00458 KRT87P-202ENST00000534226 1464 ntBASIC20.82■□□□□ 0.92
IFRD1O00458 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.82■□□□□ 0.92
IFRD1O00458 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFRD1O00458 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
IFRD1O00458 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFRD1O00458 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFRD1O00458 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
IFRD1O00458 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
IFRD1O00458 AL162430.1-201ENST00000480705 870 ntBASIC20.82■□□□□ 0.92
IFRD1O00458 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFRD1O00458 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IFRD1O00458 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IFRD1O00458 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFRD1O00458 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IFRD1O00458 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFRD1O00458 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms