Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIRPB1O00241 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIRPB1O00241 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIRPB1O00241 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.85■□□□□ 0.45
SIRPB1O00241 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.85■□□□□ 0.45
SIRPB1O00241 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIRPB1O00241 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.85■□□□□ 0.45
SIRPB1O00241 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.85■□□□□ 0.45
SIRPB1O00241 AC091305.1-201ENST00000479476 895 ntBASIC17.85■□□□□ 0.45
SIRPB1O00241 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SIRPB1O00241 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIRPB1O00241 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.85■□□□□ 0.45
SIRPB1O00241 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.85■□□□□ 0.45
SIRPB1O00241 AL139246.5-201ENST00000606645 996 ntBASIC17.85■□□□□ 0.45
SIRPB1O00241 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SIRPB1O00241 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
SIRPB1O00241 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIRPB1O00241 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIRPB1O00241 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIRPB1O00241 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SIRPB1O00241 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.84■□□□□ 0.45
SIRPB1O00241 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.84■□□□□ 0.45
SIRPB1O00241 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIRPB1O00241 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIRPB1O00241 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.84■□□□□ 0.45
SIRPB1O00241 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SIRPB1O00241 AF106564.1-201ENST00000607058 2553 ntBASIC17.84■□□□□ 0.45
SIRPB1O00241 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.84■□□□□ 0.45
SIRPB1O00241 AL031432.3-201ENST00000607698 485 ntBASIC17.84■□□□□ 0.45
SIRPB1O00241 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.84■□□□□ 0.45
SIRPB1O00241 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIRPB1O00241 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIRPB1O00241 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.84■□□□□ 0.45
SIRPB1O00241 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIRPB1O00241 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SIRPB1O00241 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.83■□□□□ 0.45
SIRPB1O00241 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIRPB1O00241 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIRPB1O00241 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.83■□□□□ 0.44
SIRPB1O00241 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.83■□□□□ 0.44
SIRPB1O00241 AL136967.2-201ENST00000623968 743 ntBASIC17.83■□□□□ 0.44
SIRPB1O00241 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIRPB1O00241 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIRPB1O00241 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.83■□□□□ 0.44
SIRPB1O00241 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIRPB1O00241 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIRPB1O00241 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.83■□□□□ 0.44
SIRPB1O00241 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.82■□□□□ 0.44
SIRPB1O00241 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.82■□□□□ 0.44
SIRPB1O00241 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.82■□□□□ 0.44
SIRPB1O00241 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SIRPB1O00241 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.82■□□□□ 0.44
SIRPB1O00241 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.82■□□□□ 0.44
SIRPB1O00241 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.82■□□□□ 0.44
SIRPB1O00241 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.82■□□□□ 0.44
SIRPB1O00241 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SIRPB1O00241 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.82■□□□□ 0.44
SIRPB1O00241 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.82■□□□□ 0.44
SIRPB1O00241 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.82■□□□□ 0.44
SIRPB1O00241 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.82■□□□□ 0.44
SIRPB1O00241 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SIRPB1O00241 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SIRPB1O00241 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIRPB1O00241 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 FEM1AP4-201ENST00000443167 1987 ntBASIC17.81■□□□□ 0.44
SIRPB1O00241 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.81■□□□□ 0.44
SIRPB1O00241 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SIRPB1O00241 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.81■□□□□ 0.44
SIRPB1O00241 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.81■□□□□ 0.44
SIRPB1O00241 AC142381.2-201ENST00000566120 298 ntBASIC17.81■□□□□ 0.44
SIRPB1O00241 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.81■□□□□ 0.44
SIRPB1O00241 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.81■□□□□ 0.44
SIRPB1O00241 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.81■□□□□ 0.44
SIRPB1O00241 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIRPB1O00241 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SIRPB1O00241 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIRPB1O00241 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms