Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
CHKB-CPT1BH3BT56 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 KLF16-203ENST00000592313 508 ntTSL 3 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 AL157384.1-201ENST00000445995 2473 ntBASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 FBXW4P1-201ENST00000426721 2239 ntBASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC11.82□□□□□ -0.52
CHKB-CPT1BH3BT56 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC11.81□□□□□ -0.52
CHKB-CPT1BH3BT56 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHKB-CPT1BH3BT56 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms