Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RTL1A6NKG5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
RTL1A6NKG5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC28.29■■■□□ 2.12
RTL1A6NKG5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC28.29■■■□□ 2.12
RTL1A6NKG5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RTL1A6NKG5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RTL1A6NKG5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RTL1A6NKG5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
RTL1A6NKG5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
RTL1A6NKG5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RTL1A6NKG5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RTL1A6NKG5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RTL1A6NKG5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RTL1A6NKG5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RTL1A6NKG5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RTL1A6NKG5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC28.27■■■□□ 2.12
RTL1A6NKG5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
RTL1A6NKG5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC28.27■■■□□ 2.12
RTL1A6NKG5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC28.27■■■□□ 2.12
RTL1A6NKG5 RARRES2P4-201ENST00000514074 484 ntBASIC28.27■■■□□ 2.12
RTL1A6NKG5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC28.27■■■□□ 2.12
RTL1A6NKG5 AL591742.1-201ENST00000604433 565 ntBASIC28.27■■■□□ 2.12
RTL1A6NKG5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
RTL1A6NKG5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC28.27■■■□□ 2.12
RTL1A6NKG5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC28.27■■■□□ 2.12
RTL1A6NKG5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.26■■■□□ 2.12
RTL1A6NKG5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.12
RTL1A6NKG5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC28.26■■■□□ 2.12
RTL1A6NKG5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC28.26■■■□□ 2.12
RTL1A6NKG5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC28.26■■■□□ 2.11
RTL1A6NKG5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RTL1A6NKG5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
RTL1A6NKG5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC28.25■■■□□ 2.11
RTL1A6NKG5 BX276092.2-201ENST00000417668 665 ntBASIC28.25■■■□□ 2.11
RTL1A6NKG5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC28.25■■■□□ 2.11
RTL1A6NKG5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RTL1A6NKG5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
RTL1A6NKG5 AC010980.2-201ENST00000587099 1412 ntBASIC28.25■■■□□ 2.11
RTL1A6NKG5 AC127496.7-201ENST00000625110 1798 ntBASIC28.25■■■□□ 2.11
RTL1A6NKG5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RTL1A6NKG5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC28.25■■■□□ 2.11
RTL1A6NKG5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
RTL1A6NKG5 POU5F1P3-201ENST00000428824 1078 ntBASIC28.24■■■□□ 2.11
RTL1A6NKG5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RTL1A6NKG5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RTL1A6NKG5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
RTL1A6NKG5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
RTL1A6NKG5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RTL1A6NKG5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RTL1A6NKG5 RNA5SP413-201ENST00000516373 109 ntBASIC28.24■■■□□ 2.11
RTL1A6NKG5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC28.24■■■□□ 2.11
RTL1A6NKG5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC28.23■■■□□ 2.11
RTL1A6NKG5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC28.23■■■□□ 2.11
RTL1A6NKG5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RTL1A6NKG5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RTL1A6NKG5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RTL1A6NKG5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
RTL1A6NKG5 FAM201B-201ENST00000458407 597 ntBASIC28.23■■■□□ 2.11
RTL1A6NKG5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC28.23■■■□□ 2.11
RTL1A6NKG5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC28.23■■■□□ 2.11
RTL1A6NKG5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RTL1A6NKG5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RTL1A6NKG5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RTL1A6NKG5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
RTL1A6NKG5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RTL1A6NKG5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RTL1A6NKG5 AC092053.2-201ENST00000640557 1818 ntBASIC28.22■■■□□ 2.11
RTL1A6NKG5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
RTL1A6NKG5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC28.22■■■□□ 2.11
RTL1A6NKG5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RTL1A6NKG5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC28.22■■■□□ 2.11
RTL1A6NKG5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC28.22■■■□□ 2.11
RTL1A6NKG5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC28.22■■■□□ 2.11
RTL1A6NKG5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC28.22■■■□□ 2.11
RTL1A6NKG5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RTL1A6NKG5 ITM2C-210ENST00000620962 501 ntBASIC28.22■■■□□ 2.11
RTL1A6NKG5 AC066615.1-201ENST00000640911 628 ntBASIC28.22■■■□□ 2.11
RTL1A6NKG5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
RTL1A6NKG5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC28.21■■■□□ 2.11
RTL1A6NKG5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC28.21■■■□□ 2.11
RTL1A6NKG5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC28.21■■■□□ 2.11
RTL1A6NKG5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RTL1A6NKG5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
RTL1A6NKG5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.11
RTL1A6NKG5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.11
RTL1A6NKG5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
RTL1A6NKG5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
RTL1A6NKG5 AC091874.3-201ENST00000512672 1195 ntBASIC28.2■■■□□ 2.1
RTL1A6NKG5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC28.2■■■□□ 2.1
RTL1A6NKG5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RTL1A6NKG5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms