Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 AC008550.1-201ENST00000511500 884 ntBASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRABD2BA6NFA1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.33■□□□□ 0.85
TRABD2BA6NFA1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRABD2BA6NFA1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRABD2BA6NFA1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRABD2BA6NFA1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.33■□□□□ 0.84
TRABD2BA6NFA1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 AC026366.1-201ENST00000488803 879 ntBASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRABD2BA6NFA1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 AC073648.6-201ENST00000641589 218 ntBASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRABD2BA6NFA1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRABD2BA6NFA1 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 MIR1224-201ENST00000408193 85 ntBASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 UBE2SP1-201ENST00000450587 669 ntBASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 UNC93B5-201ENST00000530315 699 ntBASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms