Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CNOT1A5YKK6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT1A5YKK6 LINC01960-201ENST00000563759 1884 ntBASIC20.44■□□□□ 0.86
CNOT1A5YKK6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 ARMC10P1-201ENST00000313754 855 ntBASIC20.43■□□□□ 0.86
CNOT1A5YKK6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 POM121L13P-201ENST00000422362 380 ntBASIC20.43■□□□□ 0.86
CNOT1A5YKK6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.43■□□□□ 0.86
CNOT1A5YKK6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 AC233702.5-201ENST00000584107 538 ntBASIC20.42■□□□□ 0.86
CNOT1A5YKK6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 C2orf69P4-201ENST00000565394 541 ntBASIC20.42■□□□□ 0.86
CNOT1A5YKK6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CNOT1A5YKK6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 LSM12P1-201ENST00000411836 588 ntBASIC20.41■□□□□ 0.86
CNOT1A5YKK6 AC087499.1-201ENST00000418141 1075 ntBASIC20.41■□□□□ 0.86
CNOT1A5YKK6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 MIR4785-201ENST00000585005 73 ntBASIC20.41■□□□□ 0.86
CNOT1A5YKK6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 AL135905.2-201ENST00000584934 1404 ntBASIC20.41■□□□□ 0.86
CNOT1A5YKK6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.41■□□□□ 0.86
CNOT1A5YKK6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT1A5YKK6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT1A5YKK6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT1A5YKK6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT1A5YKK6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.4■□□□□ 0.86
CNOT1A5YKK6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.4■□□□□ 0.86
CNOT1A5YKK6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CNOT1A5YKK6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.4■□□□□ 0.86
CNOT1A5YKK6 AC120498.10-201ENST00000621827 505 ntBASIC20.4■□□□□ 0.86
CNOT1A5YKK6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.39■□□□□ 0.86
CNOT1A5YKK6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT1A5YKK6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.39■□□□□ 0.86
CNOT1A5YKK6 TSPY7P-201ENST00000431358 1114 ntBASIC20.39■□□□□ 0.86
CNOT1A5YKK6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.39■□□□□ 0.86
CNOT1A5YKK6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT1A5YKK6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.39■□□□□ 0.86
CNOT1A5YKK6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT1A5YKK6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT1A5YKK6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT1A5YKK6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT1A5YKK6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT1A5YKK6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT1A5YKK6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNOT1A5YKK6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms