Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	RPP1A	YDL081C	321 nt		4.93	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YFL064C	YFL064C	525 nt		4.93	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	COQ5	YML110C	924 nt		4.93	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	ADI1	YMR009W	540 nt		4.93	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YCL022C	YCL022C	516 nt		4.93	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	THS1	YIL078W	2205 nt		4.93	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	UBP6	YFR010W	1500 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	RRN11	YML043C	1524 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	SKO1	YNL167C	1944 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	SER33	YIL074C	1410 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	SEN54	YPL083C	1404 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YHL037C	YHL037C	402 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YML031C-A	YML031C-A	336 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	PDR17	YNL264C	1053 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	snR17b	snR17b	332 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YBR076C-A	YBR076C-A	267 nt		4.92	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YDL152W	YDL152W	366 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	NAG1	YGR031C-A	492 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YGR073C	YGR073C	372 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	RPL8A	YHL033C	771 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	ECM34	YHL043W	513 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	CFD1	YIL003W	882 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YIL171W-A	YIL171W-A	453 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	NIT2	YJL126W	924 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YJL220W	YJL220W	453 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	ATG10	YLL042C	504 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	YPL135C-A	YPL135C-A	174 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	AIM4	YBR194W	372 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	FAR8	YMR029C	1572 nt		4.91	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	SYF1	YDR416W	2580 nt		4.9	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	ALR2	YFL050C	2577 nt		4.9	□□□□□ -1.62
TY4B-P	A0A0B7P3V8	snR65	snR65	100 nt		4.9	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	RTT105	YER104W	627 nt		4.9	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	SLO1	YER180C-A	258 nt		4.9	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	RTS3	YGR161C	792 nt		4.9	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	CDC42	YLR229C	576 nt		4.9	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	JLP2	YMR132C	627 nt		4.9	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	TFB2	YPL122C	1542 nt		4.9	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	ERG5	YMR015C	1617 nt		4.9	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	BOI2	YER114C	3123 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YEL057C	YEL057C	702 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YGR035W-A	YGR035W-A	222 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YJR012C	YJR012C	624 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YJR079W	YJR079W	330 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	DAD2	YKR083C	402 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	ATP14	YLR295C	375 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	SWC7	YLR385C	399 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	BSC3	YLR465C	309 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YML108W	YML108W	318 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	MED11	YMR112C	396 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	RPL18B	YNL301C	561 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	FAA1	YOR317W	2103 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	CMD1	YBR109C	444 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	SUS1	YBR111W-A	291 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	SWP82	YFL049W	1872 nt		4.89	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	ZPR1	YGR211W	1461 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	SKG6	YHR149C	2205 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	HPR1	YDR138W	2259 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	PRR1	YKL116C	1557 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	BCH2	YKR027W	2298 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	RPS11A	YDR025W	471 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	FMN1	YDR236C	657 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	tM(CAU)Q1	tM(CAU)Q1	76 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YGR025W	YGR025W	303 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YJL197C-A	YJL197C-A	282 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	SSE2	YBR169C	2082 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	RDH54	YBR073W	2877 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	RVB1	YDR190C	1392 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	ARX1	YDR101C	1782 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	NAM2	YLR382C	2685 nt		4.88	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YAP1	YML007W	1953 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	PDR10	YOR328W	4695 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	HNT1	YDL125C	477 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	COX4	YGL187C	468 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	RPL17B	YJL177W	555 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	PDP3	YLR455W	915 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YNL150W	YNL150W	408 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	MRPL51	YPR100W	423 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	CUE3	YGL110C	1875 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	PUF2	YPR042C	3228 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	VPS33	YLR396C	2076 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	AGA1	YNR044W	2178 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	ANR2	YKL047W	1551 nt		4.87	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	MTL1	YGR023W	1656 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YJR098C	YJR098C	1971 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	MET12	YPL023C	1974 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	TDA2	YER071C	381 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	SLX8	YER116C	825 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YKL044W	YKL044W	321 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	MRPL31	YKL138C	396 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	SCW10	YMR305C	1170 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YPL035C	YPL035C	348 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	NSL1	YPL233W	651 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	HPA2	YPR193C	471 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	PHO87	YCR037C	2772 nt		4.86	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	KRE6	YPR159W	2163 nt		4.85	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	DHR2	YKL078W	2208 nt		4.85	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	PAM1	YDR251W	2493 nt		4.85	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	YGL108C	YGL108C	423 nt		4.85	□□□□□ -1.63
TY4B-P	A0A0B7P3V8	SAE2	YGL175C	1038 nt		4.85	□□□□□ -1.63

Retrieved 100 of 7,029 protein–RNA pairs in 35.6 ms