Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CSNK1G3Q9Y6M4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 AC105036.2-201ENST00000569468 176 ntBASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 AC008175.2-201ENST00000612840 297 ntBASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 AC120498.10-201ENST00000621827 505 ntBASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1G3Q9Y6M4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSNK1G3Q9Y6M4 CLDN5-201ENST00000403084 2357 ntBASIC20.77■□□□□ 0.91
CSNK1G3Q9Y6M4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 AC133041.1-202ENST00000642053 222 ntBASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.76■□□□□ 0.91
CSNK1G3Q9Y6M4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 AL138781.1-201ENST00000566567 1274 ntBASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1G3Q9Y6M4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 AC069152.1-201ENST00000438030 544 ntBASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 KRT18P6-201ENST00000555540 1265 ntBASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1G3Q9Y6M4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 AC068338.2-201ENST00000563278 1430 ntBASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1G3Q9Y6M4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.72■□□□□ 0.91
CSNK1G3Q9Y6M4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms