Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 SERPINH1P1-201ENST00000419794 1249 ntBASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTCBQ9Y3I0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 AC073648.6-201ENST00000641589 218 ntBASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RTCBQ9Y3I0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
RTCBQ9Y3I0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTCBQ9Y3I0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTCBQ9Y3I0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC27■■□□□ 1.91
RTCBQ9Y3I0 AP003097.1-201ENST00000530657 1135 ntBASIC27■■□□□ 1.91
RTCBQ9Y3I0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC27■■□□□ 1.91
RTCBQ9Y3I0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTCBQ9Y3I0 AC243732.1-201ENST00000612648 864 ntBASIC27■■□□□ 1.91
RTCBQ9Y3I0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTCBQ9Y3I0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC27■■□□□ 1.91
RTCBQ9Y3I0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RTCBQ9Y3I0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RTCBQ9Y3I0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.99■■□□□ 1.91
RTCBQ9Y3I0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.99■■□□□ 1.91
RTCBQ9Y3I0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.99■■□□□ 1.91
RTCBQ9Y3I0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.99■■□□□ 1.91
RTCBQ9Y3I0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.99■■□□□ 1.91
RTCBQ9Y3I0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTCBQ9Y3I0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RTCBQ9Y3I0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.97■■□□□ 1.91
RTCBQ9Y3I0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 LSM12P1-201ENST00000411836 588 ntBASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
RTCBQ9Y3I0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
RTCBQ9Y3I0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTCBQ9Y3I0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
RTCBQ9Y3I0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RTCBQ9Y3I0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.95■■□□□ 1.9
RTCBQ9Y3I0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RTCBQ9Y3I0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.95■■□□□ 1.9
RTCBQ9Y3I0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RTCBQ9Y3I0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 AC008550.1-201ENST00000511500 884 ntBASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTCBQ9Y3I0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.93■■□□□ 1.9
RTCBQ9Y3I0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RTCBQ9Y3I0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.93■■□□□ 1.9
RTCBQ9Y3I0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.93■■□□□ 1.9
RTCBQ9Y3I0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.93■■□□□ 1.9
RTCBQ9Y3I0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms