Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF6Q9Y252 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RNF6Q9Y252 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RNF6Q9Y252 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF6Q9Y252 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF6Q9Y252 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNF6Q9Y252 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF6Q9Y252 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.86■□□□□ 0.77
RNF6Q9Y252 IGHV3-19-201ENST00000521488 291 ntBASIC19.86■□□□□ 0.77
RNF6Q9Y252 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF6Q9Y252 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF6Q9Y252 AL358852.1-201ENST00000623174 1268 ntBASIC19.86■□□□□ 0.77
RNF6Q9Y252 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF6Q9Y252 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF6Q9Y252 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RNF6Q9Y252 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF6Q9Y252 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF6Q9Y252 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF6Q9Y252 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF6Q9Y252 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF6Q9Y252 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF6Q9Y252 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF6Q9Y252 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RNF6Q9Y252 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF6Q9Y252 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF6Q9Y252 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF6Q9Y252 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF6Q9Y252 KRT18P5-201ENST00000436075 1291 ntBASIC19.85■□□□□ 0.77
RNF6Q9Y252 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
RNF6Q9Y252 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF6Q9Y252 AC022517.1-201ENST00000592429 346 ntBASIC19.85■□□□□ 0.77
RNF6Q9Y252 IKBKGP1-201ENST00000612193 1073 ntBASIC19.85■□□□□ 0.77
RNF6Q9Y252 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF6Q9Y252 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF6Q9Y252 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF6Q9Y252 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF6Q9Y252 LINC01529-204ENST00000636474 1715 ntBASIC19.85■□□□□ 0.77
RNF6Q9Y252 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF6Q9Y252 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF6Q9Y252 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF6Q9Y252 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF6Q9Y252 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF6Q9Y252 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF6Q9Y252 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 AC133637.1-201ENST00000624115 1537 ntBASIC19.84■□□□□ 0.77
RNF6Q9Y252 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF6Q9Y252 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.84■□□□□ 0.77
RNF6Q9Y252 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF6Q9Y252 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF6Q9Y252 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF6Q9Y252 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RNF6Q9Y252 AC092667.1-201ENST00000434301 2586 ntBASIC19.84■□□□□ 0.77
RNF6Q9Y252 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RNF6Q9Y252 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF6Q9Y252 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RNF6Q9Y252 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF6Q9Y252 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 MIR572-201ENST00000384983 95 ntBASIC19.83■□□□□ 0.77
RNF6Q9Y252 AC027612.3-201ENST00000413684 1047 ntBASIC19.83■□□□□ 0.77
RNF6Q9Y252 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 DUX4L2-201ENST00000561772 1275 ntBASIC19.83■□□□□ 0.77
RNF6Q9Y252 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF6Q9Y252 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
RNF6Q9Y252 DUX4L6-201ENST00000626483 1275 ntBASIC19.83■□□□□ 0.77
RNF6Q9Y252 DUX4L1-201ENST00000627662 1275 ntBASIC19.83■□□□□ 0.77
RNF6Q9Y252 DUX4L8-201ENST00000629013 1275 ntBASIC19.83■□□□□ 0.77
RNF6Q9Y252 DUX4L3-201ENST00000630187 1275 ntBASIC19.83■□□□□ 0.77
RNF6Q9Y252 DUX4L7-201ENST00000630678 1275 ntBASIC19.83■□□□□ 0.77
RNF6Q9Y252 DUX4L5-201ENST00000630834 1275 ntBASIC19.83■□□□□ 0.77
RNF6Q9Y252 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF6Q9Y252 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF6Q9Y252 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
RNF6Q9Y252 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF6Q9Y252 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF6Q9Y252 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF6Q9Y252 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF6Q9Y252 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF6Q9Y252 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF6Q9Y252 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF6Q9Y252 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF6Q9Y252 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF6Q9Y252 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms