Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CPSF2Q9P2I0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 SRD5A1P1-201ENST00000442297 786 ntBASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 MIR3181-201ENST00000578512 73 ntBASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CPSF2Q9P2I0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 AC007952.6-201ENST00000573168 2673 ntBASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 AC003957.1-201ENST00000625108 2673 ntBASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CPSF2Q9P2I0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 OR7E47P-201ENST00000546390 1422 ntBASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.23■□□□□ 0.99
CPSF2Q9P2I0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPSF2Q9P2I0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 AL512631.2-201ENST00000604634 923 ntBASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPSF2Q9P2I0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.2■□□□□ 0.98
CPSF2Q9P2I0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms