Protein–RNA interactions for Protein: Q9NYG2

ZDHHC3, Palmitoyltransferase ZDHHC3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3Q9NYG2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZDHHC3Q9NYG2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZDHHC3Q9NYG2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZDHHC3Q9NYG2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 AC026271.2-201ENST00000428091 497 ntBASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 RARRES2P6-201ENST00000567333 442 ntBASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.98■□□□□ 0.95
ZDHHC3Q9NYG2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 DUX4L2-201ENST00000561772 1275 ntBASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 EEF1DP3-203ENST00000566025 782 ntBASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 AC087623.3-201ENST00000607047 1098 ntBASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 DUX4L6-201ENST00000626483 1275 ntBASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 DUX4L1-201ENST00000627662 1275 ntBASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 DUX4L8-201ENST00000629013 1275 ntBASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 DUX4L3-201ENST00000630187 1275 ntBASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 DUX4L7-201ENST00000630678 1275 ntBASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 DUX4L5-201ENST00000630834 1275 ntBASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZDHHC3Q9NYG2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 AC034268.1-201ENST00000441047 882 ntBASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 AC053503.5-201ENST00000601508 636 ntBASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.96■□□□□ 0.95
ZDHHC3Q9NYG2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.95■□□□□ 0.95
ZDHHC3Q9NYG2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.95■□□□□ 0.94
ZDHHC3Q9NYG2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZDHHC3Q9NYG2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms