Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC1R1Q9NWW0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC1R1Q9NWW0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
HCFC1R1Q9NWW0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HCFC1R1Q9NWW0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 BX276092.2-201ENST00000417668 665 ntBASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HCFC1R1Q9NWW0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HCFC1R1Q9NWW0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.14■■□□□ 1.14
HCFC1R1Q9NWW0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
HCFC1R1Q9NWW0 AC061975.6-201ENST00000579045 1553 ntBASIC22.14■■□□□ 1.13
HCFC1R1Q9NWW0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.14■■□□□ 1.13
HCFC1R1Q9NWW0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HCFC1R1Q9NWW0 POU5F1P4-201ENST00000413175 1085 ntBASIC22.14■■□□□ 1.13
HCFC1R1Q9NWW0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.14■■□□□ 1.13
HCFC1R1Q9NWW0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
HCFC1R1Q9NWW0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
HCFC1R1Q9NWW0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HCFC1R1Q9NWW0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.14■■□□□ 1.13
HCFC1R1Q9NWW0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 AL512625.2-201ENST00000417533 625 ntBASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 RBM17P2-201ENST00000616397 1405 ntBASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC1R1Q9NWW0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 POU5F1P3-201ENST00000428824 1078 ntBASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 AC008687.6-201ENST00000596318 630 ntBASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 AC092118.2-201ENST00000613495 667 ntBASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC1R1Q9NWW0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC1R1Q9NWW0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.11■■□□□ 1.13
HCFC1R1Q9NWW0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC1R1Q9NWW0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.11■■□□□ 1.13
HCFC1R1Q9NWW0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC1R1Q9NWW0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.11■■□□□ 1.13
HCFC1R1Q9NWW0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC1R1Q9NWW0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 AC003102.1-202ENST00000563394 1796 ntBASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 KRT16P2-201ENST00000414673 1423 ntBASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 AC083880.1-201ENST00000608266 535 ntBASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC1R1Q9NWW0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC1R1Q9NWW0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms