Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIN7CQ9NUP9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 AC087239.1-201ENST00000622671 572 ntBASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIN7CQ9NUP9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 OR2I1P-207ENST00000453522 948 ntBASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIN7CQ9NUP9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 AL355001.2-201ENST00000620617 1191 ntBASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.54■□□□□ 0.4
LIN7CQ9NUP9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 MIR638-201ENST00000385237 100 ntBASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 BX842568.3-201ENST00000418104 571 ntBASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LIN7CQ9NUP9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN7CQ9NUP9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LIN7CQ9NUP9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN7CQ9NUP9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN7CQ9NUP9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN7CQ9NUP9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LIN7CQ9NUP9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms