Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.05■□□□□ 0.8
PRDM9Q9NQV7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 KRT87P-202ENST00000534226 1464 ntBASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 AC026471.6-201ENST00000622954 1905 ntBASIC20.04■□□□□ 0.8
PRDM9Q9NQV7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 CLDN5-201ENST00000403084 2357 ntBASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM9Q9NQV7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 AP004607.4-201ENST00000530158 1459 ntBASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRDM9Q9NQV7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRDM9Q9NQV7 FBXW4P1-201ENST00000426721 2239 ntBASIC20.02■□□□□ 0.79
PRDM9Q9NQV7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PRDM9Q9NQV7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRDM9Q9NQV7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PRDM9Q9NQV7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PRDM9Q9NQV7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 AC004854.2-201ENST00000608450 1441 ntBASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRDM9Q9NQV7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRDM9Q9NQV7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRDM9Q9NQV7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PRDM9Q9NQV7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 TESC-206ENST00000541210 936 ntTSL 3 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20■□□□□ 0.79
PRDM9Q9NQV7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRDM9Q9NQV7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRDM9Q9NQV7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRDM9Q9NQV7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRDM9Q9NQV7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRDM9Q9NQV7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms