Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PFDN4Q9NQP4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 OR2I1P-207ENST00000453522 948 ntBASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 AL034346.1-201ENST00000568244 1277 ntBASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PFDN4Q9NQP4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.77■□□□□ 0.91
PFDN4Q9NQP4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PFDN4Q9NQP4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 AC131281.2-201ENST00000520478 145 ntBASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PFDN4Q9NQP4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 AC010141.3-201ENST00000456659 717 ntBASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 MIR4466-201ENST00000606121 54 ntBASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PFDN4Q9NQP4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PFDN4Q9NQP4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 AL136116.3-201ENST00000402907 1138 ntBASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 MIR3181-201ENST00000578512 73 ntBASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PFDN4Q9NQP4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms