Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SLC52A3Q9NQ40 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 AP006587.3-201ENST00000525742 1516 ntBASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 AP005212.1-201ENST00000581547 1997 ntBASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 PLK5-205ENST00000642079 1969 ntBASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 AP005435.1-201ENST00000529293 1178 ntBASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A3Q9NQ40 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 SERBP1P1-201ENST00000396021 1160 ntBASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 SRD5A1P1-201ENST00000442297 786 ntBASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 AC092171.4-201ENST00000609130 632 ntBASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A3Q9NQ40 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 GABARAPL3-202ENST00000624044 1851 ntBASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 AC073314.1-201ENST00000568729 2216 ntBASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 AC006128.1-201ENST00000624704 1661 ntBASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A3Q9NQ40 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 AL138724.1-201ENST00000606771 1088 ntBASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A3Q9NQ40 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 GUSBP5-201ENST00000418136 578 ntBASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 SLC47A1P1-202ENST00000449666 945 ntBASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 AL035685.1-201ENST00000636663 812 ntBASIC20.08■□□□□ 0.81
SLC52A3Q9NQ40 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC52A3Q9NQ40 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms