Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 HLA-B-256ENST00000639848 1089 ntBASIC20.06■□□□□ 0.8
CHD8Q9HCK8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.05■□□□□ 0.8
CHD8Q9HCK8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD8Q9HCK8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 AC113347.1-201ENST00000413321 391 ntBASIC20.04■□□□□ 0.8
CHD8Q9HCK8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHD8Q9HCK8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 RBM17P2-201ENST00000616397 1405 ntBASIC20.03■□□□□ 0.8
CHD8Q9HCK8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD8Q9HCK8 AC133681.1-201ENST00000465482 601 ntBASIC20.02■□□□□ 0.8
CHD8Q9HCK8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.02■□□□□ 0.8
CHD8Q9HCK8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHD8Q9HCK8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHD8Q9HCK8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.02■□□□□ 0.79
CHD8Q9HCK8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHD8Q9HCK8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 LSM12P1-201ENST00000411836 588 ntBASIC20.01■□□□□ 0.79
CHD8Q9HCK8 AL355472.2-201ENST00000422958 438 ntBASIC20.01■□□□□ 0.79
CHD8Q9HCK8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 MTDHP1-201ENST00000605323 784 ntBASIC20.01■□□□□ 0.79
CHD8Q9HCK8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 MIR6786-201ENST00000616843 113 ntBASIC20.01■□□□□ 0.79
CHD8Q9HCK8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD8Q9HCK8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms