Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 FAM99A-202ENST00000538190 1989 ntBASIC18.82■□□□□ 0.6
C12orf49Q9H741 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
C12orf49Q9H741 AC026471.6-201ENST00000622954 1905 ntBASIC18.82■□□□□ 0.6
C12orf49Q9H741 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
C12orf49Q9H741 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
C12orf49Q9H741 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.82■□□□□ 0.6
C12orf49Q9H741 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.82■□□□□ 0.6
C12orf49Q9H741 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C12orf49Q9H741 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.82■□□□□ 0.6
C12orf49Q9H741 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C12orf49Q9H741 AC006015.1-201ENST00000429970 570 ntBASIC18.82■□□□□ 0.6
C12orf49Q9H741 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.82■□□□□ 0.6
C12orf49Q9H741 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.82■□□□□ 0.6
C12orf49Q9H741 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.82■□□□□ 0.6
C12orf49Q9H741 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.82■□□□□ 0.6
C12orf49Q9H741 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C12orf49Q9H741 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C12orf49Q9H741 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C12orf49Q9H741 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C12orf49Q9H741 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
C12orf49Q9H741 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf49Q9H741 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf49Q9H741 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf49Q9H741 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf49Q9H741 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 RARRES2P11-201ENST00000635158 484 ntBASIC18.81■□□□□ 0.6
C12orf49Q9H741 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf49Q9H741 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf49Q9H741 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf49Q9H741 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf49Q9H741 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C12orf49Q9H741 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.81■□□□□ 0.6
C12orf49Q9H741 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.8■□□□□ 0.6
C12orf49Q9H741 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
C12orf49Q9H741 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.8■□□□□ 0.6
C12orf49Q9H741 AC090192.1-201ENST00000517740 490 ntBASIC18.8■□□□□ 0.6
C12orf49Q9H741 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.8■□□□□ 0.6
C12orf49Q9H741 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
C12orf49Q9H741 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 AC003102.1-202ENST00000563394 1796 ntBASIC18.8■□□□□ 0.6
C12orf49Q9H741 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C12orf49Q9H741 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
C12orf49Q9H741 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.79■□□□□ 0.6
C12orf49Q9H741 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.79■□□□□ 0.6
C12orf49Q9H741 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 UBE2DNL-204ENST00000602536 740 ntBASIC18.79■□□□□ 0.6
C12orf49Q9H741 BID-214ENST00000617586 542 ntTSL 5 BASIC18.79■□□□□ 0.6
C12orf49Q9H741 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.79■□□□□ 0.6
C12orf49Q9H741 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
C12orf49Q9H741 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
C12orf49Q9H741 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.79■□□□□ 0.6
C12orf49Q9H741 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C12orf49Q9H741 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
C12orf49Q9H741 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
C12orf49Q9H741 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
C12orf49Q9H741 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf49Q9H741 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf49Q9H741 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.78■□□□□ 0.6
C12orf49Q9H741 EEF1DP3-203ENST00000566025 782 ntBASIC18.78■□□□□ 0.6
C12orf49Q9H741 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.78■□□□□ 0.6
C12orf49Q9H741 AC080038.1-201ENST00000611274 1154 ntBASIC18.78■□□□□ 0.6
C12orf49Q9H741 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
C12orf49Q9H741 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf49Q9H741 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf49Q9H741 AC010542.4-201ENST00000563151 1910 ntBASIC18.78■□□□□ 0.6
C12orf49Q9H741 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C12orf49Q9H741 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf49Q9H741 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
C12orf49Q9H741 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
C12orf49Q9H741 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
C12orf49Q9H741 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms