Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 AL031602.1-201ENST00000633169 911 ntBASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
KCNF1Q9H3M0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 AC009102.2-201ENST00000606772 1639 ntBASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
KCNF1Q9H3M0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNF1Q9H3M0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
KCNF1Q9H3M0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNF1Q9H3M0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.17■■□□□ 1.3
KCNF1Q9H3M0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
KCNF1Q9H3M0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
KCNF1Q9H3M0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KCNF1Q9H3M0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNF1Q9H3M0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNF1Q9H3M0 OR7E47P-201ENST00000546390 1422 ntBASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNF1Q9H3M0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
KCNF1Q9H3M0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.14■■□□□ 1.3
KCNF1Q9H3M0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
KCNF1Q9H3M0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
KCNF1Q9H3M0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 MIR6722-201ENST00000617286 78 ntBASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNF1Q9H3M0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNF1Q9H3M0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNF1Q9H3M0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNF1Q9H3M0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
KCNF1Q9H3M0 AL499627.2-201ENST00000606283 725 ntBASIC23.12■■□□□ 1.29
KCNF1Q9H3M0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNF1Q9H3M0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNF1Q9H3M0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNF1Q9H3M0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNF1Q9H3M0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms