Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.63■□□□□ 0.73
UBQLN3Q9H347 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBQLN3Q9H347 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.61■□□□□ 0.73
UBQLN3Q9H347 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.61■□□□□ 0.73
UBQLN3Q9H347 AC244015.2-201ENST00000616358 1861 ntBASIC19.6■□□□□ 0.73
UBQLN3Q9H347 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 AC092666.2-201ENST00000613287 246 ntBASIC19.6■□□□□ 0.73
UBQLN3Q9H347 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN3Q9H347 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
UBQLN3Q9H347 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN3Q9H347 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.58■□□□□ 0.73
UBQLN3Q9H347 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN3Q9H347 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN3Q9H347 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN3Q9H347 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.58■□□□□ 0.72
UBQLN3Q9H347 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN3Q9H347 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN3Q9H347 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN3Q9H347 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.58■□□□□ 0.72
UBQLN3Q9H347 AC009237.3-201ENST00000393279 1427 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms