Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.29■■□□□ 1
VPS11Q9H270 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.28■■□□□ 1
VPS11Q9H270 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.28■■□□□ 1
VPS11Q9H270 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.28■■□□□ 1
VPS11Q9H270 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 AC010525.1-201ENST00000585559 441 ntBASIC21.28■■□□□ 1
VPS11Q9H270 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.28■■□□□ 1
VPS11Q9H270 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS11Q9H270 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.27■■□□□ 1
VPS11Q9H270 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.27■■□□□ 1
VPS11Q9H270 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS11Q9H270 AC010141.3-201ENST00000456659 717 ntBASIC21.27■■□□□ 1
VPS11Q9H270 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.27■■□□□ 1
VPS11Q9H270 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.27■■□□□ 1
VPS11Q9H270 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
VPS11Q9H270 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
VPS11Q9H270 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.27■■□□□ 1
VPS11Q9H270 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.27■■□□□ 1
VPS11Q9H270 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
VPS11Q9H270 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
VPS11Q9H270 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VPS11Q9H270 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS11Q9H270 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.26■□□□□ 0.99
VPS11Q9H270 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS11Q9H270 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
VPS11Q9H270 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS11Q9H270 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
VPS11Q9H270 OXCT2P1-201ENST00000447263 1535 ntBASIC21.26■□□□□ 0.99
VPS11Q9H270 AC092171.4-201ENST00000609130 632 ntBASIC21.26■□□□□ 0.99
VPS11Q9H270 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS11Q9H270 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.26■□□□□ 0.99
VPS11Q9H270 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
VPS11Q9H270 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS11Q9H270 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS11Q9H270 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS11Q9H270 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS11Q9H270 LINC01006-201ENST00000333319 2292 ntBASIC21.25■□□□□ 0.99
VPS11Q9H270 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS11Q9H270 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS11Q9H270 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS11Q9H270 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS11Q9H270 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.25■□□□□ 0.99
VPS11Q9H270 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS11Q9H270 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS11Q9H270 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS11Q9H270 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS11Q9H270 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
VPS11Q9H270 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS11Q9H270 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS11Q9H270 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.24■□□□□ 0.99
VPS11Q9H270 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS11Q9H270 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS11Q9H270 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS11Q9H270 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VPS11Q9H270 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS11Q9H270 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS11Q9H270 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS11Q9H270 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS11Q9H270 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VPS11Q9H270 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS11Q9H270 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS11Q9H270 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
VPS11Q9H270 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS11Q9H270 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS11Q9H270 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
VPS11Q9H270 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS11Q9H270 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS11Q9H270 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS11Q9H270 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS11Q9H270 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
VPS11Q9H270 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.23■□□□□ 0.99
VPS11Q9H270 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
VPS11Q9H270 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS11Q9H270 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS11Q9H270 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS11Q9H270 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS11Q9H270 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
VPS11Q9H270 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VPS11Q9H270 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.22■□□□□ 0.99
VPS11Q9H270 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS11Q9H270 AL512631.2-201ENST00000604634 923 ntBASIC21.22■□□□□ 0.99
VPS11Q9H270 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS11Q9H270 FEM1AP1-201ENST00000431297 1995 ntBASIC21.22■□□□□ 0.99
VPS11Q9H270 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS11Q9H270 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS11Q9H270 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS11Q9H270 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS11Q9H270 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS11Q9H270 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS11Q9H270 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms