Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 MIR3181-201ENST00000578512 73 ntBASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 AC068587.7-201ENST00000641602 218 ntBASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
AMBRA1Q9C0C7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.78■□□□□ 0.76
AMBRA1Q9C0C7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 OR2I1P-207ENST00000453522 948 ntBASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AMBRA1Q9C0C7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AMBRA1Q9C0C7 FEM1AP1-201ENST00000431297 1995 ntBASIC19.77■□□□□ 0.75
AMBRA1Q9C0C7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
AMBRA1Q9C0C7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AMBRA1Q9C0C7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AMBRA1Q9C0C7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 MIR638-201ENST00000385237 100 ntBASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 AC092171.4-201ENST00000609130 632 ntBASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.76■□□□□ 0.75
AMBRA1Q9C0C7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AMBRA1Q9C0C7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AMBRA1Q9C0C7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms