Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 AC011767.1-201ENST00000617410 1153 ntBASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 KRT87P-202ENST00000534226 1464 ntBASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RPAP1Q9BWH6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 NCF1B-203ENST00000435988 1254 ntBASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 MFSD11-216ENST00000590393 1141 ntBASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RPAP1Q9BWH6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.84■■□□□ 1.73
RPAP1Q9BWH6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
RPAP1Q9BWH6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RPAP1Q9BWH6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RPAP1Q9BWH6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.83■■□□□ 1.73
RPAP1Q9BWH6 OR7E47P-201ENST00000546390 1422 ntBASIC25.83■■□□□ 1.73
RPAP1Q9BWH6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.82■■□□□ 1.72
RPAP1Q9BWH6 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.82■■□□□ 1.72
RPAP1Q9BWH6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
RPAP1Q9BWH6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RPAP1Q9BWH6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
RPAP1Q9BWH6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.82■■□□□ 1.72
RPAP1Q9BWH6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.82■■□□□ 1.72
RPAP1Q9BWH6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RPAP1Q9BWH6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 AC009237.3-201ENST00000393279 1427 ntBASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 AL109923.1-201ENST00000618799 583 ntBASIC25.81■■□□□ 1.72
RPAP1Q9BWH6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RPAP1Q9BWH6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RPAP1Q9BWH6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RPAP1Q9BWH6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.8■■□□□ 1.72
RPAP1Q9BWH6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
RPAP1Q9BWH6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.8■■□□□ 1.72
RPAP1Q9BWH6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RPAP1Q9BWH6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 AL355802.2-201ENST00000402069 882 ntBASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 AL034346.1-201ENST00000568244 1277 ntBASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
RPAP1Q9BWH6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RPAP1Q9BWH6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
RPAP1Q9BWH6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.78■■□□□ 1.72
RPAP1Q9BWH6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.78■■□□□ 1.72
RPAP1Q9BWH6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.78■■□□□ 1.72
RPAP1Q9BWH6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RPAP1Q9BWH6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RPAP1Q9BWH6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RPAP1Q9BWH6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RPAP1Q9BWH6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.77■■□□□ 1.72
RPAP1Q9BWH6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RPAP1Q9BWH6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.77■■□□□ 1.72
RPAP1Q9BWH6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RPAP1Q9BWH6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms