Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VRK1Q99986 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VRK1Q99986 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
VRK1Q99986 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VRK1Q99986 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VRK1Q99986 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
VRK1Q99986 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.61■□□□□ 0.57
VRK1Q99986 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VRK1Q99986 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.61■□□□□ 0.57
VRK1Q99986 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VRK1Q99986 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.61■□□□□ 0.57
VRK1Q99986 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
VRK1Q99986 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VRK1Q99986 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
VRK1Q99986 AC010141.3-201ENST00000456659 717 ntBASIC18.61■□□□□ 0.57
VRK1Q99986 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.61■□□□□ 0.57
VRK1Q99986 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VRK1Q99986 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VRK1Q99986 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
VRK1Q99986 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.6■□□□□ 0.57
VRK1Q99986 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK1Q99986 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK1Q99986 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.6■□□□□ 0.57
VRK1Q99986 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VRK1Q99986 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VRK1Q99986 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK1Q99986 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VRK1Q99986 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.6■□□□□ 0.57
VRK1Q99986 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
VRK1Q99986 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.6■□□□□ 0.57
VRK1Q99986 KRT18P5-201ENST00000436075 1291 ntBASIC18.6■□□□□ 0.57
VRK1Q99986 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VRK1Q99986 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.6■□□□□ 0.57
VRK1Q99986 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.6■□□□□ 0.57
VRK1Q99986 KRT18P14-201ENST00000534205 1250 ntBASIC18.6■□□□□ 0.57
VRK1Q99986 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK1Q99986 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
VRK1Q99986 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK1Q99986 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VRK1Q99986 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
VRK1Q99986 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
VRK1Q99986 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.59■□□□□ 0.57
VRK1Q99986 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK1Q99986 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VRK1Q99986 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK1Q99986 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK1Q99986 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.59■□□□□ 0.57
VRK1Q99986 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.59■□□□□ 0.57
VRK1Q99986 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VRK1Q99986 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VRK1Q99986 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VRK1Q99986 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.59■□□□□ 0.57
VRK1Q99986 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VRK1Q99986 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.59■□□□□ 0.57
VRK1Q99986 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.59■□□□□ 0.57
VRK1Q99986 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK1Q99986 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK1Q99986 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.59■□□□□ 0.57
VRK1Q99986 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VRK1Q99986 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VRK1Q99986 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.58■□□□□ 0.57
VRK1Q99986 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VRK1Q99986 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
VRK1Q99986 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VRK1Q99986 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VRK1Q99986 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK1Q99986 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VRK1Q99986 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.58■□□□□ 0.56
VRK1Q99986 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK1Q99986 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VRK1Q99986 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
VRK1Q99986 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VRK1Q99986 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.58■□□□□ 0.56
VRK1Q99986 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.58■□□□□ 0.56
VRK1Q99986 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK1Q99986 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VRK1Q99986 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VRK1Q99986 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.57■□□□□ 0.56
VRK1Q99986 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.57■□□□□ 0.56
VRK1Q99986 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.57■□□□□ 0.56
VRK1Q99986 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.57■□□□□ 0.56
VRK1Q99986 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VRK1Q99986 C11orf96-202ENST00000528572 1834 ntBASIC18.57■□□□□ 0.56
VRK1Q99986 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VRK1Q99986 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms