Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A3Q99624 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A3Q99624 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A3Q99624 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC38A3Q99624 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A3Q99624 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC38A3Q99624 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A3Q99624 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC38A3Q99624 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC38A3Q99624 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A3Q99624 AC008175.2-201ENST00000612840 297 ntBASIC20.57■□□□□ 0.88
SLC38A3Q99624 AL109923.1-201ENST00000618799 583 ntBASIC20.57■□□□□ 0.88
SLC38A3Q99624 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A3Q99624 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC38A3Q99624 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC38A3Q99624 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC38A3Q99624 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A3Q99624 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A3Q99624 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC38A3Q99624 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC38A3Q99624 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A3Q99624 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A3Q99624 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC38A3Q99624 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC38A3Q99624 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.56■□□□□ 0.88
SLC38A3Q99624 AC120498.10-201ENST00000621827 505 ntBASIC20.56■□□□□ 0.88
SLC38A3Q99624 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A3Q99624 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A3Q99624 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC38A3Q99624 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A3Q99624 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A3Q99624 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A3Q99624 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A3Q99624 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC38A3Q99624 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC38A3Q99624 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A3Q99624 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC38A3Q99624 NCF1B-203ENST00000435988 1254 ntBASIC20.55■□□□□ 0.88
SLC38A3Q99624 AC104771.1-201ENST00000603335 964 ntBASIC20.55■□□□□ 0.88
SLC38A3Q99624 AC005181.1-201ENST00000604782 1256 ntBASIC20.55■□□□□ 0.88
SLC38A3Q99624 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.55■□□□□ 0.88
SLC38A3Q99624 AC010536.3-201ENST00000620306 533 ntBASIC20.55■□□□□ 0.88
SLC38A3Q99624 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A3Q99624 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC38A3Q99624 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A3Q99624 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC38A3Q99624 AC092053.2-201ENST00000640557 1818 ntBASIC20.55■□□□□ 0.88
SLC38A3Q99624 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A3Q99624 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A3Q99624 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A3Q99624 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC38A3Q99624 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC38A3Q99624 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC38A3Q99624 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A3Q99624 GPX1P1-201ENST00000388829 606 ntBASIC20.54■□□□□ 0.88
SLC38A3Q99624 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC38A3Q99624 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC38A3Q99624 SLC7A5P2-201ENST00000553010 536 ntBASIC20.54■□□□□ 0.88
SLC38A3Q99624 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A3Q99624 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC38A3Q99624 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A3Q99624 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
SLC38A3Q99624 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.53■□□□□ 0.88
SLC38A3Q99624 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SLC38A3Q99624 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC38A3Q99624 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC38A3Q99624 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC38A3Q99624 SLC7A5P1-201ENST00000568957 537 ntBASIC20.53■□□□□ 0.88
SLC38A3Q99624 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC38A3Q99624 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC38A3Q99624 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SLC38A3Q99624 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 AC127496.7-201ENST00000625110 1798 ntBASIC20.53■□□□□ 0.88
SLC38A3Q99624 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC38A3Q99624 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A3Q99624 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A3Q99624 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC38A3Q99624 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A3Q99624 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC38A3Q99624 AC080038.3-201ENST00000623346 1952 ntBASIC20.52■□□□□ 0.88
SLC38A3Q99624 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A3Q99624 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A3Q99624 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A3Q99624 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A3Q99624 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A3Q99624 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A3Q99624 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
SLC38A3Q99624 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
SLC38A3Q99624 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
SLC38A3Q99624 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC38A3Q99624 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms