Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCL13Q99616 AC034268.1-201ENST00000441047 882 ntBASIC17.77■□□□□ 0.44
CCL13Q99616 DUX4L2-201ENST00000561772 1275 ntBASIC17.77■□□□□ 0.44
CCL13Q99616 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
CCL13Q99616 DUX4L6-201ENST00000626483 1275 ntBASIC17.77■□□□□ 0.44
CCL13Q99616 DUX4L1-201ENST00000627662 1275 ntBASIC17.77■□□□□ 0.44
CCL13Q99616 DUX4L8-201ENST00000629013 1275 ntBASIC17.77■□□□□ 0.44
CCL13Q99616 DUX4L3-201ENST00000630187 1275 ntBASIC17.77■□□□□ 0.44
CCL13Q99616 DUX4L7-201ENST00000630678 1275 ntBASIC17.77■□□□□ 0.44
CCL13Q99616 DUX4L5-201ENST00000630834 1275 ntBASIC17.77■□□□□ 0.44
CCL13Q99616 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.77■□□□□ 0.44
CCL13Q99616 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL13Q99616 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.77■□□□□ 0.43
CCL13Q99616 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCL13Q99616 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.77■□□□□ 0.43
CCL13Q99616 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
CCL13Q99616 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.76■□□□□ 0.43
CCL13Q99616 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.76■□□□□ 0.43
CCL13Q99616 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL13Q99616 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCL13Q99616 LINC00565-201ENST00000562710 2331 ntBASIC17.76■□□□□ 0.43
CCL13Q99616 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL13Q99616 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCL13Q99616 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.76■□□□□ 0.43
CCL13Q99616 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.76■□□□□ 0.43
CCL13Q99616 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.76■□□□□ 0.43
CCL13Q99616 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL13Q99616 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL13Q99616 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL13Q99616 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CCL13Q99616 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL13Q99616 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
CCL13Q99616 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.75■□□□□ 0.43
CCL13Q99616 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.75■□□□□ 0.43
CCL13Q99616 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.75■□□□□ 0.43
CCL13Q99616 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCL13Q99616 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.75■□□□□ 0.43
CCL13Q99616 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCL13Q99616 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCL13Q99616 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL13Q99616 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.74■□□□□ 0.43
CCL13Q99616 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL13Q99616 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL13Q99616 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCL13Q99616 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL13Q99616 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCL13Q99616 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.74■□□□□ 0.43
CCL13Q99616 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.74■□□□□ 0.43
CCL13Q99616 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL13Q99616 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.74■□□□□ 0.43
CCL13Q99616 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL13Q99616 AC104564.3-201ENST00000582367 638 ntBASIC17.74■□□□□ 0.43
CCL13Q99616 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 MIR5787-201ENST00000611784 55 ntBASIC17.74■□□□□ 0.43
CCL13Q99616 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCL13Q99616 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL13Q99616 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL13Q99616 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL13Q99616 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL13Q99616 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL13Q99616 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL13Q99616 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCL13Q99616 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCL13Q99616 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL13Q99616 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCL13Q99616 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL13Q99616 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.73■□□□□ 0.43
CCL13Q99616 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.73■□□□□ 0.43
CCL13Q99616 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL13Q99616 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL13Q99616 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL13Q99616 KRT87P-202ENST00000534226 1464 ntBASIC17.73■□□□□ 0.43
CCL13Q99616 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.73■□□□□ 0.43
CCL13Q99616 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.73■□□□□ 0.43
CCL13Q99616 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms