Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.21■□□□□ 0.99
NDNQ99608 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.21■□□□□ 0.99
NDNQ99608 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.21■□□□□ 0.99
NDNQ99608 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.21■□□□□ 0.99
NDNQ99608 AC133561.4-201ENST00000566112 224 ntBASIC21.21■□□□□ 0.99
NDNQ99608 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDNQ99608 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NDNQ99608 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NDNQ99608 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
NDNQ99608 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDNQ99608 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDNQ99608 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDNQ99608 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.2■□□□□ 0.98
NDNQ99608 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NDNQ99608 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDNQ99608 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.2■□□□□ 0.98
NDNQ99608 AC099791.1-201ENST00000416440 715 ntBASIC21.2■□□□□ 0.98
NDNQ99608 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NDNQ99608 AL034346.1-201ENST00000568244 1277 ntBASIC21.2■□□□□ 0.98
NDNQ99608 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.2■□□□□ 0.98
NDNQ99608 SMUG1P1-201ENST00000590640 811 ntBASIC21.2■□□□□ 0.98
NDNQ99608 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NDNQ99608 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.2■□□□□ 0.98
NDNQ99608 AC110285.6-201ENST00000617652 491 ntBASIC21.2■□□□□ 0.98
NDNQ99608 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.2■□□□□ 0.98
NDNQ99608 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.2■□□□□ 0.98
NDNQ99608 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NDNQ99608 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NDNQ99608 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDNQ99608 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.2■□□□□ 0.98
NDNQ99608 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NDNQ99608 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDNQ99608 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.19■□□□□ 0.98
NDNQ99608 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDNQ99608 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.19■□□□□ 0.98
NDNQ99608 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDNQ99608 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDNQ99608 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.19■□□□□ 0.98
NDNQ99608 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.19■□□□□ 0.98
NDNQ99608 AC104564.3-201ENST00000582367 638 ntBASIC21.19■□□□□ 0.98
NDNQ99608 AC106739.1-201ENST00000617035 715 ntBASIC21.19■□□□□ 0.98
NDNQ99608 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.19■□□□□ 0.98
NDNQ99608 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NDNQ99608 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.19■□□□□ 0.98
NDNQ99608 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NDNQ99608 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.19■□□□□ 0.98
NDNQ99608 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.19■□□□□ 0.98
NDNQ99608 AC003102.1-202ENST00000563394 1796 ntBASIC21.18■□□□□ 0.98
NDNQ99608 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NDNQ99608 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.18■□□□□ 0.98
NDNQ99608 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.18■□□□□ 0.98
NDNQ99608 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NDNQ99608 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NDNQ99608 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.18■□□□□ 0.98
NDNQ99608 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NDNQ99608 IGHV3-19-201ENST00000521488 291 ntBASIC21.18■□□□□ 0.98
NDNQ99608 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NDNQ99608 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
NDNQ99608 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NDNQ99608 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.18■□□□□ 0.98
NDNQ99608 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.18■□□□□ 0.98
NDNQ99608 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.18■□□□□ 0.98
NDNQ99608 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.18■□□□□ 0.98
NDNQ99608 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.18■□□□□ 0.98
NDNQ99608 AL391422.3-201ENST00000603791 2761 ntBASIC21.18■□□□□ 0.98
NDNQ99608 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.18■□□□□ 0.98
NDNQ99608 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NDNQ99608 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDNQ99608 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDNQ99608 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDNQ99608 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NDNQ99608 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NDNQ99608 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.17■□□□□ 0.98
NDNQ99608 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.17■□□□□ 0.98
NDNQ99608 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.17■□□□□ 0.98
NDNQ99608 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NDNQ99608 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDNQ99608 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NDNQ99608 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.17■□□□□ 0.98
NDNQ99608 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDNQ99608 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NDNQ99608 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.16■□□□□ 0.98
NDNQ99608 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NDNQ99608 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.16■□□□□ 0.98
NDNQ99608 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NDNQ99608 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.16■□□□□ 0.98
NDNQ99608 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.16■□□□□ 0.98
NDNQ99608 AP001330.3-201ENST00000520123 633 ntBASIC21.16■□□□□ 0.98
NDNQ99608 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.16■□□□□ 0.98
NDNQ99608 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.16■□□□□ 0.98
NDNQ99608 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.16■□□□□ 0.98
NDNQ99608 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms