Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AC097658.1-201ENST00000475555 843 ntBASIC20.86■□□□□ 0.93
PCDH15Q96QU1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 RBM17P2-201ENST00000616397 1405 ntBASIC20.85■□□□□ 0.93
PCDH15Q96QU1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 AL596275.1-201ENST00000423464 877 ntBASIC20.85■□□□□ 0.93
PCDH15Q96QU1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH15Q96QU1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 AL158047.1-201ENST00000445918 881 ntBASIC20.84■□□□□ 0.93
PCDH15Q96QU1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDH15Q96QU1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH15Q96QU1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH15Q96QU1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH15Q96QU1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH15Q96QU1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH15Q96QU1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
PCDH15Q96QU1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH15Q96QU1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH15Q96QU1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDH15Q96QU1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH15Q96QU1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH15Q96QU1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH15Q96QU1 KRT16P2-201ENST00000414673 1423 ntBASIC20.82■□□□□ 0.92
PCDH15Q96QU1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH15Q96QU1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH15Q96QU1 AP006294.2-201ENST00000641667 209 ntBASIC20.82■□□□□ 0.92
PCDH15Q96QU1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH15Q96QU1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH15Q96QU1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH15Q96QU1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH15Q96QU1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 AP003097.1-201ENST00000530657 1135 ntBASIC20.81■□□□□ 0.92
PCDH15Q96QU1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH15Q96QU1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 AC128676.1-201ENST00000454392 318 ntBASIC20.8■□□□□ 0.92
PCDH15Q96QU1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH15Q96QU1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 AC026366.1-201ENST00000488803 879 ntBASIC20.79■□□□□ 0.92
PCDH15Q96QU1 UNC93B4-201ENST00000505679 747 ntBASIC20.79■□□□□ 0.92
PCDH15Q96QU1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms