Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 AC087393.1-201ENST00000582896 145 ntBASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 AC073314.1-201ENST00000568729 2216 ntBASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IPQ96QF0 PCDHAC2-203ENST00000615316 3011 ntBASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 AC022413.1-201ENST00000624602 984 ntBASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RAB3IPQ96QF0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RAB3IPQ96QF0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.64■□□□□ 0.9
RAB3IPQ96QF0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3IPQ96QF0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3IPQ96QF0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3IPQ96QF0 C17orf82-201ENST00000623772 1530 ntBASIC20.64■□□□□ 0.9
RAB3IPQ96QF0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IPQ96QF0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB3IPQ96QF0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 FP325331.1-202ENST00000623531 1380 ntBASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IPQ96QF0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms