Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 AC010141.2-201ENST00000452426 721 ntBASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 AC068587.7-201ENST00000641602 218 ntBASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 AC092865.7-201ENST00000641832 219 ntBASIC20.33■□□□□ 0.85
CNTNAP3BQ96NU0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.33■□□□□ 0.84
CNTNAP3BQ96NU0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.33■□□□□ 0.84
CNTNAP3BQ96NU0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CNTNAP3BQ96NU0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP3BQ96NU0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 AC010141.3-201ENST00000456659 717 ntBASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 MIR4785-201ENST00000585005 73 ntBASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP3BQ96NU0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 AC233263.1-201ENST00000578059 224 ntBASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CNTNAP3BQ96NU0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 AC010980.2-201ENST00000587099 1412 ntBASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3BQ96NU0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 AL049637.2-201ENST00000641778 930 ntBASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3BQ96NU0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 AC009237.3-201ENST00000393279 1427 ntBASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3BQ96NU0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms