Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.36■□□□□ 0.53
APOBEC3DQ96AK3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOBEC3DQ96AK3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 ZNRF2P3-201ENST00000424200 374 ntBASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
APOBEC3DQ96AK3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
APOBEC3DQ96AK3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APOBEC3DQ96AK3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APOBEC3DQ96AK3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
APOBEC3DQ96AK3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
APOBEC3DQ96AK3 LINC02228-203ENST00000641970 1355 ntBASIC18.33■□□□□ 0.53
APOBEC3DQ96AK3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOBEC3DQ96AK3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APOBEC3DQ96AK3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOBEC3DQ96AK3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
APOBEC3DQ96AK3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APOBEC3DQ96AK3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
APOBEC3DQ96AK3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.33■□□□□ 0.52
APOBEC3DQ96AK3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOBEC3DQ96AK3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
APOBEC3DQ96AK3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 Z98882.1-201ENST00000622160 2253 ntBASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 AC123595.1-201ENST00000440769 1046 ntBASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOBEC3DQ96AK3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOBEC3DQ96AK3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms