Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE4Q96A23 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.03■□□□□ 0.64
CPNE4Q96A23 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE4Q96A23 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE4Q96A23 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE4Q96A23 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE4Q96A23 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CPNE4Q96A23 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE4Q96A23 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE4Q96A23 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE4Q96A23 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CPNE4Q96A23 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE4Q96A23 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE4Q96A23 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE4Q96A23 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CPNE4Q96A23 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE4Q96A23 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE4Q96A23 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE4Q96A23 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE4Q96A23 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE4Q96A23 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE4Q96A23 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE4Q96A23 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE4Q96A23 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CPNE4Q96A23 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE4Q96A23 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CPNE4Q96A23 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE4Q96A23 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE4Q96A23 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE4Q96A23 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPNE4Q96A23 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CPNE4Q96A23 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE4Q96A23 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE4Q96A23 AC003102.1-202ENST00000563394 1796 ntBASIC19.01■□□□□ 0.63
CPNE4Q96A23 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE4Q96A23 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE4Q96A23 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE4Q96A23 AC053503.5-201ENST00000601508 636 ntBASIC19.01■□□□□ 0.63
CPNE4Q96A23 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE4Q96A23 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE4Q96A23 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE4Q96A23 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CPNE4Q96A23 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE4Q96A23 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE4Q96A23 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 C11orf96-202ENST00000528572 1834 ntBASIC19■□□□□ 0.63
CPNE4Q96A23 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CPNE4Q96A23 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 EEF1DP3-203ENST00000566025 782 ntBASIC19■□□□□ 0.63
CPNE4Q96A23 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19■□□□□ 0.63
CPNE4Q96A23 AC104187.1-201ENST00000607510 612 ntBASIC19■□□□□ 0.63
CPNE4Q96A23 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19■□□□□ 0.63
CPNE4Q96A23 AL024507.2-201ENST00000606070 2574 ntBASIC19■□□□□ 0.63
CPNE4Q96A23 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19■□□□□ 0.63
CPNE4Q96A23 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19■□□□□ 0.63
CPNE4Q96A23 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE4Q96A23 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE4Q96A23 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE4Q96A23 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE4Q96A23 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE4Q96A23 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.99■□□□□ 0.63
CPNE4Q96A23 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE4Q96A23 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE4Q96A23 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE4Q96A23 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE4Q96A23 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE4Q96A23 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE4Q96A23 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CPNE4Q96A23 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE4Q96A23 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE4Q96A23 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.98■□□□□ 0.63
CPNE4Q96A23 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.98■□□□□ 0.63
CPNE4Q96A23 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.98■□□□□ 0.63
CPNE4Q96A23 AC138907.5-202ENST00000569484 235 ntBASIC18.98■□□□□ 0.63
CPNE4Q96A23 KRT18P61-201ENST00000585825 1298 ntBASIC18.98■□□□□ 0.63
CPNE4Q96A23 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE4Q96A23 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms