Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S1Q92572 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3S1Q92572 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S1Q92572 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S1Q92572 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3S1Q92572 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S1Q92572 MIR4281-201ENST00000580852 62 ntBASIC18.66■□□□□ 0.58
AP3S1Q92572 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
AP3S1Q92572 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
AP3S1Q92572 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S1Q92572 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP3S1Q92572 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S1Q92572 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.66■□□□□ 0.58
AP3S1Q92572 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S1Q92572 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
AP3S1Q92572 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
AP3S1Q92572 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S1Q92572 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.65■□□□□ 0.58
AP3S1Q92572 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S1Q92572 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.65■□□□□ 0.58
AP3S1Q92572 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S1Q92572 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
AP3S1Q92572 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.65■□□□□ 0.58
AP3S1Q92572 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S1Q92572 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S1Q92572 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S1Q92572 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S1Q92572 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S1Q92572 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S1Q92572 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
AP3S1Q92572 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP3S1Q92572 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP3S1Q92572 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S1Q92572 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
AP3S1Q92572 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3S1Q92572 AL391422.3-201ENST00000603791 2761 ntBASIC18.64■□□□□ 0.57
AP3S1Q92572 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3S1Q92572 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
AP3S1Q92572 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S1Q92572 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.64■□□□□ 0.57
AP3S1Q92572 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
AP3S1Q92572 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S1Q92572 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3S1Q92572 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S1Q92572 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP3S1Q92572 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S1Q92572 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
AP3S1Q92572 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.63■□□□□ 0.57
AP3S1Q92572 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S1Q92572 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.63■□□□□ 0.57
AP3S1Q92572 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S1Q92572 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
AP3S1Q92572 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.63■□□□□ 0.57
AP3S1Q92572 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S1Q92572 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3S1Q92572 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S1Q92572 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S1Q92572 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
AP3S1Q92572 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3S1Q92572 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
AP3S1Q92572 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3S1Q92572 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S1Q92572 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S1Q92572 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.63■□□□□ 0.57
AP3S1Q92572 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3S1Q92572 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.62■□□□□ 0.57
AP3S1Q92572 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3S1Q92572 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S1Q92572 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S1Q92572 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
AP3S1Q92572 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S1Q92572 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S1Q92572 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3S1Q92572 THA1P-201ENST00000590384 1145 ntBASIC18.62■□□□□ 0.57
AP3S1Q92572 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S1Q92572 AC026471.6-201ENST00000622954 1905 ntBASIC18.62■□□□□ 0.57
AP3S1Q92572 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S1Q92572 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S1Q92572 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S1Q92572 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3S1Q92572 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
AP3S1Q92572 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3S1Q92572 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S1Q92572 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S1Q92572 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S1Q92572 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
AP3S1Q92572 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
AP3S1Q92572 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3S1Q92572 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S1Q92572 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3S1Q92572 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S1Q92572 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.61■□□□□ 0.57
AP3S1Q92572 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S1Q92572 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S1Q92572 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S1Q92572 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3S1Q92572 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S1Q92572 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms